RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SSX8Q7RTT4 187 aa21.63■■□□□ 1.05
CPNE1-216ENST00000437340 FAM90A1Q86YD7 464 aa21.63■■□□□ 1.05
CPNE1-216ENST00000437340 IL22RA2Q969J5 263 aa21.63■■□□□ 1.05
CPNE1-216ENST00000437340 SEBOXQ9HB31 216 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-216ENST00000437340 TAF9BQ9HBM6 251 aa21.63■■□□□ 1.05
CPNE1-216ENST00000437340 KCNIP1Q9NZI2 227 aa21.63■■□□□ 1.05
CPNE1-216ENST00000437340 PKD1L2Q7Z442 2459 aa21.63■■□□□ 1.05
CPNE1-216ENST00000437340 PGLYRP1O75594 196 aaPredicted RBP21.62■■□□□ 1.05
CPNE1-216ENST00000437340 MBPP02686 304 aaPredicted RBP21.62■■□□□ 1.05
CPNE1-216ENST00000437340 HEXAP06865 529 aa21.62■■□□□ 1.05
CPNE1-216ENST00000437340 HKR1P10072 659 aa21.62■■□□□ 1.05
CPNE1-216ENST00000437340 SNTB1Q13884 538 aaKnown RBP21.62■■□□□ 1.05
CPNE1-216ENST00000437340 ZNF695Q8IW36 515 aa21.62■■□□□ 1.05
CPNE1-216ENST00000437340 AKR1E2Q96JD6 320 aa21.62■■□□□ 1.05
CPNE1-216ENST00000437340 PLEKHA2Q9HB19 425 aa21.62■■□□□ 1.05
CPNE1-216ENST00000437340 OR1A1Q9P1Q5 309 aa21.62■■□□□ 1.05
CPNE1-216ENST00000437340 PFDN2Q9UHV9 154 aa21.62■■□□□ 1.05
CPNE1-216ENST00000437340 E5RGE8 158 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 K7EPK0 472 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 CCKARP32238 428 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 ATRXP46100 2492 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 TESK1Q15569 626 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 AANATQ16613 207 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 FOXRED2Q8IWF2 684 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 SELENOHQ8IZQ5 122 aaKnown RBP21.61■■□□□ 1.05
CPNE1-216ENST00000437340 FAM71E2Q8N5Q1 922 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 LRRC29Q8WV35 223 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 CXorf58Q96LI9 332 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 SPIN2AQ99865 258 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 SPIN2BQ9BPZ2 258 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 NSG2Q9Y328 171 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 LSM5Q9Y4Y9 91 aaKnown RBP21.61■■□□□ 1.05
CPNE1-216ENST00000437340 SRRM5B3KS81 715 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 C16orf97H3BN30 126 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 CD40P25942 277 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 PAX5Q02548 391 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 LY6DQ14210 128 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 BAP18Q8IXM2 172 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 OR5D13Q8NGL4 314 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 OR4D5Q8NGN0 318 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 JKAMPQ9P055 326 aa21.61■■□□□ 1.05
CPNE1-216ENST00000437340 TRAV39A0A0B4J263 110 aa21.6■■□□□ 1.05
CPNE1-216ENST00000437340 ZSCAN5BA6NJL1 495 aa21.6■■□□□ 1.05
CPNE1-216ENST00000437340 ATP6V1G2-DDX39BF2Z307 99 aa21.6■■□□□ 1.05
CPNE1-216ENST00000437340 HSPA12AO43301 675 aa21.6■■□□□ 1.05
CPNE1-216ENST00000437340 F2RP25116 425 aa21.6■■□□□ 1.05
CPNE1-216ENST00000437340 RPL12P30050 165 aaKnown RBP21.6■■□□□ 1.05
CPNE1-216ENST00000437340 SELENOVP59797 346 aa21.6■■□□□ 1.05
CPNE1-216ENST00000437340 RBPJQ06330 500 aa21.6■■□□□ 1.05
CPNE1-216ENST00000437340 FAM219AQ8IW50 185 aa21.6■■□□□ 1.05
CPNE1-216ENST00000437340 OOEPA6NGQ2 149 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 ST8SIA3O43173 380 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 SCGB1D2O95969 90 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 EIF5AP63241 154 aaKnown RBP21.59■■□□□ 1.05
CPNE1-216ENST00000437340 TOR2AQ5JU69 321 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 RELL2Q8NC24 303 aaPredicted RBP21.59■■□□□ 1.05
CPNE1-216ENST00000437340 NUP37Q8NFH4 326 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 RBPMSQ93062 196 aaKnown RBP21.59■■□□□ 1.05
CPNE1-216ENST00000437340 DMRTA2Q96SC8 542 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 REG4Q9BYZ8 158 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 MFSD2BA6NFX1 497 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 OR3A1P47881 315 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 PRR18Q8N4B5 295 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 OR52M1Q8NGK5 317 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 LRRC20Q8TCA0 184 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 MEGF10Q96KG7 1140 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 SDHAF2Q9NX18 166 aa21.59■■□□□ 1.05
CPNE1-216ENST00000437340 ACACBO00763 2458 aa21.58■■□□□ 1.05
CPNE1-216ENST00000437340 RP1L1Q8IWN7 2480 aaPredicted RBP21.58■■□□□ 1.05
CPNE1-216ENST00000437340 CLEC18AA5D8T8 446 aa21.58■■□□□ 1.04
CPNE1-216ENST00000437340 VDAC1P21796 283 aa21.58■■□□□ 1.04
CPNE1-216ENST00000437340 P2RX3P56373 397 aa21.58■■□□□ 1.04
CPNE1-216ENST00000437340 COL10A1Q03692 680 aa21.58■■□□□ 1.04
CPNE1-216ENST00000437340 TMEM108Q6UXF1 575 aa21.58■■□□□ 1.04
CPNE1-216ENST00000437340 C22orf34Q6ZV56 151 aa21.58■■□□□ 1.04
CPNE1-216ENST00000437340 CLEC18CQ8NCF0 446 aa21.58■■□□□ 1.04
CPNE1-216ENST00000437340 ANGPTL6Q8NI99 470 aa21.58■■□□□ 1.04
CPNE1-216ENST00000437340 OR2V2Q96R30 315 aa21.58■■□□□ 1.04
CPNE1-216ENST00000437340 POMT1Q9Y6A1 747 aa21.58■■□□□ 1.04
CPNE1-216ENST00000437340 NBEAQ8NFP9 2946 aa21.58■■□□□ 1.04
CPNE1-216ENST00000437340 I3L521 148 aa21.57■■□□□ 1.04
CPNE1-216ENST00000437340 FAM74A1Q5RGS3 127 aa21.57■■□□□ 1.04
CPNE1-216ENST00000437340 VHLLQ6RSH7 139 aa21.57■■□□□ 1.04
CPNE1-216ENST00000437340 GALMQ96C23 342 aa21.57■■□□□ 1.04
CPNE1-216ENST00000437340 COQ2Q96H96 371 aa21.57■■□□□ 1.04
CPNE1-216ENST00000437340 ABHD14BQ96IU4 210 aa21.57■■□□□ 1.04
CPNE1-216ENST00000437340 TOLLIPQ9H0E2 274 aa21.57■■□□□ 1.04
CPNE1-216ENST00000437340 DNTTIP1Q9H147 329 aa21.57■■□□□ 1.04
CPNE1-216ENST00000437340 ZC4H2Q9NQZ6 224 aa21.57■■□□□ 1.04
CPNE1-216ENST00000437340 NKX2-6A6NCS4 301 aa21.56■■□□□ 1.04
CPNE1-216ENST00000437340 PTAFRP25105 342 aa21.56■■□□□ 1.04
CPNE1-216ENST00000437340 CEACAM6P40199 344 aa21.56■■□□□ 1.04
CPNE1-216ENST00000437340 GATA4P43694 442 aa21.56■■□□□ 1.04
CPNE1-216ENST00000437340 AESQ08117 197 aa21.56■■□□□ 1.04
CPNE1-216ENST00000437340 TPRP12270 2363 aaKnown RBP21.56■■□□□ 1.04
CPNE1-216ENST00000437340 SPTA1P02549 2419 aa21.56■■□□□ 1.04
CPNE1-216ENST00000437340 IGLV2-14P01704 120 aa21.56■■□□□ 1.04
CPNE1-216ENST00000437340 PRDX2P32119 198 aa21.56■■□□□ 1.04
CPNE1-216ENST00000437340 P2RY1P47900 373 aa21.56■■□□□ 1.04
CPNE1-216ENST00000437340 NMSQ5H8A3 153 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms