RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 AJUBAQ96IF1 538 aa11.71□□□□□ -0.53
CSTF3-202ENST00000431742 ZNF48Q96MX3 618 aaPredicted RBP11.71□□□□□ -0.53
CSTF3-202ENST00000431742 SUCNR1Q9BXA5 334 aa11.71□□□□□ -0.53
CSTF3-202ENST00000431742 CLEC7AQ9BXN2 247 aa11.71□□□□□ -0.53
CSTF3-202ENST00000431742 MS4A7Q9GZW8 240 aaPredicted RBP11.71□□□□□ -0.53
CSTF3-202ENST00000431742 PRDM13Q9H4Q3 707 aa11.71□□□□□ -0.53
CSTF3-202ENST00000431742 TAF9BQ9HBM6 251 aa11.71□□□□□ -0.53
CSTF3-202ENST00000431742 ZNF286AQ9HBT8 521 aa11.71□□□□□ -0.53
CSTF3-202ENST00000431742 COMMD3Q9UBI1 195 aa11.71□□□□□ -0.53
CSTF3-202ENST00000431742 RSL24D1Q9UHA3 163 aaKnown RBP11.71□□□□□ -0.53
CSTF3-202ENST00000431742 ELF5Q9UKW6 265 aaPredicted RBP11.71□□□□□ -0.53
CSTF3-202ENST00000431742 SMIM31A0A1B0GVY4 71 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 SPINT2O43291 252 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 XRCC3O43542 346 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 HBZP02008 142 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 CD3GP09693 182 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 SOX6P35712 828 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 PNLIPRP3Q17RR3 467 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 CDNFQ49AH0 187 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 HACD4Q5VWC8 232 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 MZT2AQ6P582 158 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 OR1L1Q8NH94 360 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 UBALD1Q8TB05 177 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 SLIRPQ9GZT3 109 aaKnown RBP11.7□□□□□ -0.54
CSTF3-202ENST00000431742 CHMP1AQ9HD42 196 aaPredicted RBP11.7□□□□□ -0.54
CSTF3-202ENST00000431742 Q9N2K0 584 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 RAB9BQ9NP90 201 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 KCNIP1Q9NZI2 227 aa11.7□□□□□ -0.54
CSTF3-202ENST00000431742 TRAV18A0A075B6X5 111 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 A0A0U1RQK1 487 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 A0A1W2PRD5 423 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 A0A1W2PRF3 423 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 A0A1W2PRM7 423 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 FAM172BPA6NC97 362 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 TMEM235A6NFC5 223 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 CCDC160A6NGH7 325 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 HPGDSO60760 199 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 IGLV1-47P01700 117 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 MELTFP08582 738 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 FCGR3AP08637 254 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 HLA-DRB3P79483 266 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 DEFB112Q30KQ8 113 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 LDLRAD2Q5SZI1 272 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 C5orf24Q7Z6I8 188 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 ABHD12Q8N2K0 398 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 BEND2Q8NDZ0 799 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 OR4P4Q8NGL7 312 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 PHF21AQ96BD5 680 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 S100A16Q96FQ6 103 aaKnown RBP11.69□□□□□ -0.54
CSTF3-202ENST00000431742 AUNIPQ9H7T9 357 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 DIABLOQ9NR28 239 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 GFOD1Q9NXC2 390 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 MGAT4AQ9UM21 535 aa11.69□□□□□ -0.54
CSTF3-202ENST00000431742 MDFIC2A0A1B0GVS7 189 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 MEIOCA2RUB1 952 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 DPPA5A6NC42 116 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 SDCBPO00560 298 aaPredicted RBP11.68□□□□□ -0.54
CSTF3-202ENST00000431742 SSX5O60225 188 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 ARG1P05089 322 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 ELK1P19419 428 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 DTYMKP23919 212 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 NFYBP25208 207 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 HTD2P86397 168 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 PITPNAQ00169 270 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 ARFRP1Q13795 201 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 SRSF7Q16629 238 aaKnown RBP eCLIP11.68□□□□□ -0.54
CSTF3-202ENST00000431742 Q3ZCU0 254 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 FOXB2Q5VYV0 432 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 Q6ZS49 121 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 PRIMA1Q86XR5 153 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 SIGLECL1Q8N7X8 197 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 C8orf31Q8N9H6 132 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 OR9G1Q8NH87 305 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 SETD6Q8TBK2 473 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 ZNF596Q8TC21 504 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 NUDCD2Q8WVJ2 157 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 NXF2Q9GZY0 626 aaKnown RBP11.68□□□□□ -0.54
CSTF3-202ENST00000431742 MIXL1Q9H2W2 232 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 NDUFA13Q9P0J0 144 aa11.68□□□□□ -0.54
CSTF3-202ENST00000431742 TBL2Q9Y4P3 447 aaKnown RBP11.68□□□□□ -0.54
CSTF3-202ENST00000431742 ATRQ13535 2644 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 RIPPLY3P57055 190 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 TAS2R20P59543 309 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 MRPS15P82914 257 aaKnown RBP11.67□□□□□ -0.54
CSTF3-202ENST00000431742 LTC4SQ16873 150 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 HLA-DRB5Q30154 266 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 TMEM69Q5SWH9 247 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 MINOS1Q5TGZ0 78 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 FAM53AQ6NSI3 398 aaPredicted RBP11.67□□□□□ -0.54
CSTF3-202ENST00000431742 LHFPL4Q7Z7J7 247 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 LDLRAD3Q86YD5 345 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 IZUMO1Q8IYV9 350 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 PRR18Q8N4B5 295 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 ZNF439Q8NDP4 499 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 C17orf50Q8WW18 174 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 LEAP2Q969E1 77 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 JPT1Q9UK76 154 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 PSG11Q9UQ72 335 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 MINOS1-NBL1R4GNA1 71 aa11.67□□□□□ -0.54
CSTF3-202ENST00000431742 A0A0A6YYJ9 748 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms