RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ARL11Q969Q4 196 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 Q96M66 194 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 MYCBPQ99417 103 aaPredicted RBP9.28□□□□□ -0.92
HDAC4-202ENST00000430200 HSPB9Q9BQS6 159 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 PLSCR3Q9NRY6 295 aa9.28□□□□□ -0.92
HDAC4-202ENST00000430200 HUWE1Q7Z6Z7 4374 aaKnown RBP9.28□□□□□ -0.92
HDAC4-202ENST00000430200 M0QZK8 103 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 CCRL2O00421 344 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 FGF16O43320 207 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 SC5DO75845 299 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 MPIG6BO95866 241 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 IGHG2P01859 326 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 PF4P02776 101 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 CSTBP04080 98 aaKnown RBP9.27□□□□□ -0.93
HDAC4-202ENST00000430200 FAM106CPP0CH98 169 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 GTF2F2P13984 249 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 MGMTP16455 207 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 CAPGP40121 348 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 DEFB136Q30KP8 78 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 CT45A1Q5HYN5 189 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 C6orf141Q5SZD1 244 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 AWAT2Q6E213 333 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 OR10K2Q6IF99 312 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 RAB12Q6IQ22 244 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 C11orf87Q6NUJ2 197 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 REC114Q7Z4M0 266 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 LINC00596Q86U02 117 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 DHRSXQ8N5I4 330 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 LINC00311Q8N616 119 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 PACRGLQ8N7B6 248 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 CT45A3Q8NHU0 189 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 NEK7Q8TDX7 302 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 FAM46BQ96A09 425 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 PCDHB16Q9NRJ7 776 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 LSM2Q9Y333 95 aaKnown RBP9.27□□□□□ -0.93
HDAC4-202ENST00000430200 STAB2Q8WWQ8 2551 aa9.27□□□□□ -0.93
HDAC4-202ENST00000430200 IRGMA1A4Y4 181 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 CASQ2O14958 399 aaPredicted RBP9.26□□□□□ -0.93
HDAC4-202ENST00000430200 HBZP02008 142 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 SNRPBP14678 240 aaKnown RBP9.26□□□□□ -0.93
HDAC4-202ENST00000430200 CELP19835 753 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 GPR12P47775 334 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 THBS3P49746 956 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 ZNF137PP52743 207 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 WNT4P56705 351 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 CFHR3Q02985 330 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 SYT6Q5T7P8 510 aaPredicted RBP9.26□□□□□ -0.93
HDAC4-202ENST00000430200 TTC23Q5W5X9 447 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 SLC25A48Q6ZT89 311 aaKnown RBP9.26□□□□□ -0.93
HDAC4-202ENST00000430200 SLC35E3Q7Z769 313 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 MOB3BQ86TA1 216 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 LRRTM1Q86UE6 522 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 ODF3L1Q8IXM7 274 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 STPG2Q8N412 459 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 PRR18Q8N4B5 295 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 FAM71E2Q8N5Q1 922 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 SETD9Q8NE22 299 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 OR52M1Q8NGK5 317 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 MRPL30Q8TCC3 161 aaKnown RBP9.26□□□□□ -0.93
HDAC4-202ENST00000430200 P2RX4Q99571 388 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 SELENOIQ9C0D9 397 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 PARP12Q9H0J9 701 aaKnown RBP9.26□□□□□ -0.93
HDAC4-202ENST00000430200 ETAA1Q9NY74 926 aa9.26□□□□□ -0.93
HDAC4-202ENST00000430200 CNOT2Q9NZN8 540 aaKnown RBP9.26□□□□□ -0.93
HDAC4-202ENST00000430200 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.26□□□□□ -0.93
HDAC4-202ENST00000430200 NKX1-2Q9UD57 310 aaPredicted RBP9.26□□□□□ -0.93
HDAC4-202ENST00000430200 A0A0A6YYD4 124 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 UBE2QL1A1L167 161 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 EFCAB10A6NFE3 127 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 SERPINE3A8MV23 424 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 ORC5O43913 435 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 RPLP1P05386 114 aaKnown RBP9.25□□□□□ -0.93
HDAC4-202ENST00000430200 CNTFRP26992 372 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 F2RL1P55085 397 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 SLC35A2P78381 396 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 EGFEM1PQ0D2K5 195 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 UNC119Q13432 240 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 SLC16A12Q6ZSM3 486 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 C10orf67Q8IYJ2 551 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 C8orf59Q8N0T1 100 aaPredicted RBP9.25□□□□□ -0.93
HDAC4-202ENST00000430200 NANOGP1Q8N7R0 232 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 C8orf31Q8N9H6 132 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 KLHL30-AS1Q8NEE0 82 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 BPIFB6Q8NFQ5 453 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 TFAP2CQ92754 450 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 RAX2Q96IS3 184 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 RITA1Q96K30 269 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 GFI1Q99684 422 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 SULT4A1Q9BR01 284 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 NICN1Q9BSH3 213 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 MBNL3Q9NUK0 354 aaKnown RBP9.25□□□□□ -0.93
HDAC4-202ENST00000430200 PEX16Q9Y5Y5 336 aa9.25□□□□□ -0.93
HDAC4-202ENST00000430200 MYL12BO14950 172 aa9.24□□□□□ -0.93
HDAC4-202ENST00000430200 ZNF780AO75290 641 aaPredicted RBP9.24□□□□□ -0.93
HDAC4-202ENST00000430200 CRTAPO75718 401 aaPredicted RBP9.24□□□□□ -0.93
HDAC4-202ENST00000430200 GAPDHP04406 335 aaKnown RBP9.24□□□□□ -0.93
HDAC4-202ENST00000430200 CHATP28329 748 aa9.24□□□□□ -0.93
HDAC4-202ENST00000430200 PPP1CCP36873 323 aaKnown RBP9.24□□□□□ -0.93
HDAC4-202ENST00000430200 LSAMPQ13449 338 aa9.24□□□□□ -0.93
HDAC4-202ENST00000430200 TGIF2LXQ8IUE1 241 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms