RNA–Protein interactions for RNA: ENST00000430104.5

SHH-202, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-202ENST00000430104 FAM89BQ8N5H3 189 aa15.08■□□□□ 0
SHH-202ENST00000430104 OR10A7Q8NGE5 316 aa15.08■□□□□ 0
SHH-202ENST00000430104 OR1L1Q8NH94 360 aa15.08■□□□□ 0
SHH-202ENST00000430104 SETD6Q8TBK2 473 aa15.08■□□□□ 0
SHH-202ENST00000430104 YIPF6Q96EC8 236 aa15.08■□□□□ 0
SHH-202ENST00000430104 LINC00574Q9H8X3 128 aa15.08■□□□□ 0
SHH-202ENST00000430104 KCNIP1Q9NZI2 227 aa15.08■□□□□ 0
SHH-202ENST00000430104 C1RLQ9NZP8 487 aa15.08■□□□□ 0
SHH-202ENST00000430104 DPM3Q9P2X0 92 aa15.08■□□□□ 0
SHH-202ENST00000430104 FBLN5Q9UBX5 448 aa15.08■□□□□ 0
SHH-202ENST00000430104 DAPK2Q9UIK4 370 aa15.08■□□□□ 0
SHH-202ENST00000430104 PSG11Q9UQ72 335 aa15.08■□□□□ 0
SHH-202ENST00000430104 LEUTXA8MZ59 168 aa15.07■□□□□ 0
SHH-202ENST00000430104 BUB1B-PAK6H3BSN5 160 aa15.07■□□□□ 0
SHH-202ENST00000430104 J3QR06 171 aa15.07■□□□□ 0
SHH-202ENST00000430104 SPINT2O43291 252 aa15.07■□□□□ 0
SHH-202ENST00000430104 IGLV1-47P01700 117 aa15.07■□□□□ 0
SHH-202ENST00000430104 HBZP02008 142 aa15.07■□□□□ 0
SHH-202ENST00000430104 TGFBR1P36897 503 aa15.07■□□□□ 0
SHH-202ENST00000430104 LSM3P62310 102 aaKnown RBP15.07■□□□□ 0
SHH-202ENST00000430104 AWAT1Q58HT5 328 aa15.07■□□□□ 0
SHH-202ENST00000430104 Q6ZTK2 550 aa15.07■□□□□ 0
SHH-202ENST00000430104 GAPTQ8N292 157 aa15.07■□□□□ 0
SHH-202ENST00000430104 OR56B1Q8NGI3 324 aa15.07■□□□□ 0
SHH-202ENST00000430104 ARHGAP5-AS1Q96IT6 56 aa15.07■□□□□ 0
SHH-202ENST00000430104 PECRQ9BY49 303 aa15.07■□□□□ 0
SHH-202ENST00000430104 TAF9BQ9HBM6 251 aa15.07■□□□□ 0
SHH-202ENST00000430104 AK3Q9UIJ7 227 aa15.07■□□□□ 0
SHH-202ENST00000430104 AIREO43918 545 aa15.06■□□□□ 0
SHH-202ENST00000430104 TMEM50BP56557 158 aa15.06■□□□□ 0
SHH-202ENST00000430104 AANATQ16613 207 aa15.06■□□□□ 0
SHH-202ENST00000430104 TIMM50Q3ZCQ8 353 aa15.06■□□□□ 0
SHH-202ENST00000430104 DHRS7BQ6IAN0 325 aaPredicted RBP15.06■□□□□ 0
SHH-202ENST00000430104 TRAT1Q6PIZ9 186 aa15.06■□□□□ 0
SHH-202ENST00000430104 OR10V1Q8NGI7 309 aa15.06■□□□□ 0
SHH-202ENST00000430104 PIFOQ8TCI5 191 aa15.06■□□□□ 0
SHH-202ENST00000430104 HDHD3Q9BSH5 251 aaPredicted RBP15.06■□□□□ 0
SHH-202ENST00000430104 MMP28Q9H239 520 aa15.06■□□□□ 0
SHH-202ENST00000430104 RAB9BQ9NP90 201 aa15.06■□□□□ 0
SHH-202ENST00000430104 GFOD1Q9NXC2 390 aa15.06■□□□□ 0
SHH-202ENST00000430104 A0A075B6Q4 140 aa15.05■□□□□ -0
SHH-202ENST00000430104 TRIM64CA6NLI5 447 aa15.05■□□□□ -0
SHH-202ENST00000430104 FOXI3A8MTJ6 420 aaPredicted RBP15.05■□□□□ -0
SHH-202ENST00000430104 SNRPBP14678 240 aaKnown RBP15.05■□□□□ -0
SHH-202ENST00000430104 MDKP21741 143 aaPredicted RBP15.05■□□□□ -0
SHH-202ENST00000430104 CFPP27918 469 aa15.05■□□□□ -0
SHH-202ENST00000430104 CEACAM3P40198 252 aa15.05■□□□□ -0
SHH-202ENST00000430104 RAG2P55895 527 aa15.05■□□□□ -0
SHH-202ENST00000430104 RELBQ01201 579 aa15.05■□□□□ -0
SHH-202ENST00000430104 MOGAT2Q3SYC2 334 aa15.05■□□□□ -0
SHH-202ENST00000430104 TPTE2P1Q5T6R2 138 aa15.05■□□□□ -0
SHH-202ENST00000430104 SFXN4Q6P4A7 337 aa15.05■□□□□ -0
SHH-202ENST00000430104 C3orf56Q8N813 242 aa15.05■□□□□ -0
SHH-202ENST00000430104 CREB3L1Q96BA8 519 aa15.05■□□□□ -0
SHH-202ENST00000430104 ATG5Q9H1Y0 275 aa15.05■□□□□ -0
SHH-202ENST00000430104 MBNL3Q9NUK0 354 aaKnown RBP15.05■□□□□ -0
SHH-202ENST00000430104 GNG12Q9UBI6 72 aa15.05■□□□□ -0
SHH-202ENST00000430104 AMMECR1Q9Y4X0 333 aaPredicted RBP15.05■□□□□ -0
SHH-202ENST00000430104 VGLL3A8MV65 326 aa15.04■□□□□ -0
SHH-202ENST00000430104 F2RL2O00254 374 aa15.04■□□□□ -0
SHH-202ENST00000430104 SMIM18P0DKX4 95 aa15.04■□□□□ -0
SHH-202ENST00000430104 RAB6AP20340 208 aa15.04■□□□□ -0
SHH-202ENST00000430104 CD24P25063 80 aa15.04■□□□□ -0
SHH-202ENST00000430104 COMPP49747 757 aaPredicted RBP15.04■□□□□ -0
SHH-202ENST00000430104 LOXL3P58215 753 aa15.04■□□□□ -0
SHH-202ENST00000430104 PLAC9Q5JTB6 97 aa15.04■□□□□ -0
SHH-202ENST00000430104 IDNKQ5T6J7 187 aa15.04■□□□□ -0
SHH-202ENST00000430104 OLFML2AQ68BL7 652 aa15.04■□□□□ -0
SHH-202ENST00000430104 SLC16A12Q6ZSM3 486 aa15.04■□□□□ -0
SHH-202ENST00000430104 TMEM219Q86XT9 240 aa15.04■□□□□ -0
SHH-202ENST00000430104 OR52L2PQ8NGH6 319 aa15.04■□□□□ -0
SHH-202ENST00000430104 OR52M1Q8NGK5 317 aa15.04■□□□□ -0
SHH-202ENST00000430104 OR10X1Q8NGY0 326 aa15.04■□□□□ -0
SHH-202ENST00000430104 RPEQ96AT9 228 aa15.04■□□□□ -0
SHH-202ENST00000430104 HSF4Q9ULV5 492 aa15.04■□□□□ -0
SHH-202ENST00000430104 METTL21EPA6NDL7 271 aa15.03■□□□□ -0
SHH-202ENST00000430104 LY6LH3BQJ8 138 aa15.03■□□□□ -0
SHH-202ENST00000430104 RPL15P61313 204 aaKnown RBP15.03■□□□□ -0
SHH-202ENST00000430104 OR10R2Q8NGX6 335 aa15.03■□□□□ -0
SHH-202ENST00000430104 OR4F5Q8NH21 305 aa15.03■□□□□ -0
SHH-202ENST00000430104 TOMM40LQ969M1 308 aa15.03■□□□□ -0
SHH-202ENST00000430104 RAB3CQ96E17 227 aa15.03■□□□□ -0
SHH-202ENST00000430104 CMSS1Q9BQ75 279 aaKnown RBP15.03■□□□□ -0
SHH-202ENST00000430104 OR2S2Q9NQN1 319 aa15.03■□□□□ -0
SHH-202ENST00000430104 TCF19Q9Y242 345 aa15.03■□□□□ -0
SHH-202ENST00000430104 SLC31A2O15432 143 aa15.02■□□□□ -0
SHH-202ENST00000430104 NAPSAO96009 420 aa15.02■□□□□ -0
SHH-202ENST00000430104 GNB3P16520 340 aa15.02■□□□□ -0
SHH-202ENST00000430104 BRS3P32247 399 aa15.02■□□□□ -0
SHH-202ENST00000430104 ARHGDIBP52566 201 aa15.02■□□□□ -0
SHH-202ENST00000430104 DIAPH2-AS1Q14236 149 aa15.02■□□□□ -0
SHH-202ENST00000430104 CCBE1Q6UXH8 406 aaPredicted RBP15.02■□□□□ -0
SHH-202ENST00000430104 Q6ZPA2 131 aa15.02■□□□□ -0
SHH-202ENST00000430104 Q6ZSV7 163 aa15.02■□□□□ -0
SHH-202ENST00000430104 LGALS14Q8TCE9 139 aa15.02■□□□□ -0
SHH-202ENST00000430104 IL1F10Q8WWZ1 152 aa15.02■□□□□ -0
SHH-202ENST00000430104 FUNDC2Q9BWH2 189 aa15.02■□□□□ -0
SHH-202ENST00000430104 RIMS4Q9H426 269 aaPredicted RBP15.02■□□□□ -0
SHH-202ENST00000430104 BEX1Q9HBH7 125 aa15.02■□□□□ -0
SHH-202ENST00000430104 ABRACLQ9P1F3 81 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms