RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 SPRR3Q9UBC9 169 aa2.32□□□□□ -2.04
LINC00407-201ENST00000426509 IL36RNQ9UBH0 155 aa2.32□□□□□ -2.04
LINC00407-201ENST00000426509 B4GALT7Q9UBV7 327 aa2.32□□□□□ -2.04
LINC00407-201ENST00000426509 LPAR3Q9UBY5 353 aa2.32□□□□□ -2.04
LINC00407-201ENST00000426509 ZNF629Q9UEG4 869 aaPredicted RBP2.32□□□□□ -2.04
LINC00407-201ENST00000426509 PRSS50Q9UI38 385 aa2.32□□□□□ -2.04
LINC00407-201ENST00000426509 CDC42EP3Q9UKI2 254 aa2.32□□□□□ -2.04
LINC00407-201ENST00000426509 SLC7A11Q9UPY5 501 aa2.32□□□□□ -2.04
LINC00407-201ENST00000426509 ST3GAL6Q9Y274 331 aa2.32□□□□□ -2.04
LINC00407-201ENST00000426509 RCL1Q9Y2P8 373 aaKnown RBP2.32□□□□□ -2.04
LINC00407-201ENST00000426509 MEMO1Q9Y316 297 aa2.32□□□□□ -2.04
LINC00407-201ENST00000426509 FAM96BQ9Y3D0 163 aa2.32□□□□□ -2.04
LINC00407-201ENST00000426509 LSM5Q9Y4Y9 91 aaKnown RBP2.32□□□□□ -2.04
LINC00407-201ENST00000426509 APC2O95996 2303 aa2.32□□□□□ -2.04
LINC00407-201ENST00000426509 FBN3Q75N90 2809 aa2.32□□□□□ -2.04
LINC00407-201ENST00000426509 URB1O60287 2271 aaKnown RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 CSMD1Q96PZ7 3565 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 MGAQ8IWI9 3026 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 PTPRBP23467 1997 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 TRAV24A0A0B4J272 114 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 IGSF23A1L1A6 192 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 C5orf49A4QMS7 147 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 FAM24AA6NFZ4 105 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 SLC22A20A6NK97 555 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 OR5B21A6NL26 309 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 ZNF705EA8MWA4 302 aaPredicted RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 ZNF732B4DXR9 585 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 E5RGE8 158 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 NPIPB11E5RHQ5 1161 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 RNASEK-C17orf49H0YIS7 233 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 K7N7A8 449 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 TSPAN4O14817 238 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 MPPED1O15442 326 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 PHF1O43189 567 aaPredicted RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 GPR137BO60478 399 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 PITX3O75364 302 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 MED6O75586 246 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 OR7C1O76099 320 aaPredicted RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 TNFSF15O95150 251 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 DIRAS3O95661 229 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 SCGB1D2O95969 90 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 IFNA21P01568 189 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 CD5P06127 495 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 SP1P08047 785 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 WNT2P09544 360 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 SCTP09683 121 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 OR8U9P0C7N5 309 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 SPP1P10451 314 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 CTRB1P17538 263 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 UCP1P25874 307 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 ITGA3P26006 1051 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 DUSP1P28562 367 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 GNRHRP30968 328 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 ARR3P36575 388 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 HAAOP46952 286 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 P2RY1P47900 373 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 CAV2P51636 162 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 GPM6AP51674 278 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 UCP2P55851 309 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 TMEM33P57088 247 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 HERV-K104P61576 105 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 POLR2GP62487 172 aaKnown RBP eCLIP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 RAB1AP62820 205 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 EIF5AP63241 154 aaKnown RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 BLOC1S1P78537 153 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 HLA-DRB3P79483 266 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 PMP22Q01453 160 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 DEFA5Q01523 94 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 PLGLB1Q02325 96 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 IL13RA2Q14627 380 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 ZNF169Q14929 603 aaPredicted RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 RNPS1Q15287 305 aaKnown RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 GUSBP1Q15486 140 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 TSC22D1Q15714 1073 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 HFEQ30201 348 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 CEACAM21Q3KPI0 293 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 ABCA11PQ4W5N1 156 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 HIKESHIQ53FT3 197 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 NMSQ5H8A3 153 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 ATP1A1-AS1Q5TC04 95 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 ZNF324BQ6AW86 544 aaPredicted RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 SP5Q6BEB4 398 aaPredicted RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 CTRB2Q6GPI1 263 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 DHRS7BQ6IAN0 325 aaPredicted RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 Q6P435 159 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 HAGHLQ6PII5 290 aaPredicted RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 Q6ZRG5 221 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 DPPA2Q7Z7J5 298 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 WDR86Q86TI4 376 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 LINC00596Q86U02 117 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 TBC1D26Q86UD7 250 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 MDP1Q86V88 176 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 MYPOPQ86VE0 399 aaPredicted RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 FOXRED2Q8IWF2 684 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 ODF3L1Q8IXM7 274 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 MKXQ8IYA7 352 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 CCDC36Q8IYA8 594 aa2.31□□□□□ -2.04
LINC00407-201ENST00000426509 H1FOOQ8IZA3 346 aaPredicted RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 SELENOHQ8IZQ5 122 aaKnown RBP2.31□□□□□ -2.04
LINC00407-201ENST00000426509 FAM185AQ8N0U4 392 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms