RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 FAM90A10PA6NDY2 464 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 G3V2T6 193 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 C15orf65H3BRN8 121 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 J3QLW9 94 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 ORC5O43913 435 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 OR7C1O76099 320 aaPredicted RBP11.31□□□□□ -0.6
PDAP1-202ENST00000426447 CSTBP04080 98 aaKnown RBP11.31□□□□□ -0.6
PDAP1-202ENST00000426447 ZNF19P17023 458 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 SLC25A48Q6ZT89 311 aaKnown RBP11.31□□□□□ -0.6
PDAP1-202ENST00000426447 LYPD6Q86Y78 171 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 Q8N1Y9 231 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 NEK7Q8TDX7 302 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 ZNF251Q9BRH9 671 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 RSRP1Q9BUV0 290 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 ELOVL1Q9BW60 279 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 TOLLIPQ9H0E2 274 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 C19orf73Q9NVV2 129 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 GNG12Q9UBI6 72 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 ST3GAL6Q9Y274 331 aa11.31□□□□□ -0.6
PDAP1-202ENST00000426447 IGHV4OR15-8A0A075B7B6 117 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 A0A087WW49 117 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 SLC16A6O15403 523 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 SLC31A2O15432 143 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 ARSBP15848 533 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 GNGT1P63211 74 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 ALKBH1Q13686 389 aaKnown RBP11.3□□□□□ -0.6
PDAP1-202ENST00000426447 Q3ZCU0 254 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 ATAD3CQ5T2N8 411 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 LIN54Q6MZP7 749 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 HAPLN4Q86UW8 402 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 ANKRD13BQ86YJ7 626 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 OR8J1Q8NGP2 316 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 IL17DQ8TAD2 202 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 FLYWCH2Q96CP2 140 aaKnown RBP11.3□□□□□ -0.6
PDAP1-202ENST00000426447 ING4Q9UNL4 249 aa11.3□□□□□ -0.6
PDAP1-202ENST00000426447 A0A1W2PN81 502 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 OR4C45A6NMZ5 311 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 A8MZ25 164 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 GABRPO00591 440 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 SPINT2O43291 252 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 HSPA12AO43301 675 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 LGALS1P09382 135 aaKnown RBP11.29□□□□□ -0.6
PDAP1-202ENST00000426447 T-ENOLP0DO92 83 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 RAB3AP20336 220 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 CHRNA7P36544 502 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 VHLP40337 213 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 ACTBP60709 375 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 LSAMPQ13449 338 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 ECSCRQ19T08 205 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 KDM4DQ6B0I6 523 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 PRR18Q8N4B5 295 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 STX19Q8N4C7 294 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 MINDY2Q8NBR6 621 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 OR10V1Q8NGI7 309 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 CASTOR1Q8WTX7 329 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 TSEN15Q8WW01 171 aaKnown RBP11.29□□□□□ -0.6
PDAP1-202ENST00000426447 S100A13Q99584 98 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 ANKRD60Q9BZ19 345 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 TUBA4BQ9H853 241 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 RAB9BQ9NP90 201 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 ZNF581Q9P0T4 197 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 STUB1Q9UNE7 303 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 DHDHQ9UQ10 334 aa11.29□□□□□ -0.6
PDAP1-202ENST00000426447 IGHV7-81A0A0B4J1V7 117 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 TCRBV3S1A0A5B6 114 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 AIPO00170 330 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 HLA-DRB1P01911 266 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 HSPB1P04792 205 aaKnown RBP11.28□□□□□ -0.6
PDAP1-202ENST00000426447 RPSAP08865 295 aaKnown RBP11.28□□□□□ -0.6
PDAP1-202ENST00000426447 BLVRBP30043 206 aaPredicted RBP11.28□□□□□ -0.6
PDAP1-202ENST00000426447 POLR2IP36954 125 aaKnown RBP11.28□□□□□ -0.6
PDAP1-202ENST00000426447 ZNF134P52741 427 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 ZNF137PP52743 207 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 HAGHQ16775 308 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 CT45A1Q5HYN5 189 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 ZDHHC13Q8IUH4 622 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 PARP16Q8N5Y8 322 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 OR52N1Q8NH53 320 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 CT45A3Q8NHU0 189 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 PELI1Q96FA3 418 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 RITA1Q96K30 269 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 C4orf36Q96KX1 117 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 METTL9Q9H1A3 318 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 RIBC2Q9H4K1 309 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 KIAA1456Q9P272 454 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 TRAPPC2LQ9UL33 140 aa11.28□□□□□ -0.6
PDAP1-202ENST00000426447 CSMD3Q7Z407 3707 aa11.27□□□□□ -0.6
PDAP1-202ENST00000426447 STARD9Q9P2P6 4700 aa11.27□□□□□ -0.61
PDAP1-202ENST00000426447 GEMIN2O14893 280 aaKnown RBP11.27□□□□□ -0.61
PDAP1-202ENST00000426447 NBR2O15453 112 aa11.27□□□□□ -0.61
PDAP1-202ENST00000426447 LANCL1O43813 399 aa11.27□□□□□ -0.61
PDAP1-202ENST00000426447 CDRT1O95170 752 aa11.27□□□□□ -0.61
PDAP1-202ENST00000426447 IGHV3-11P01762 117 aa11.27□□□□□ -0.61
PDAP1-202ENST00000426447 MT-ND4P03905 459 aa11.27□□□□□ -0.61
PDAP1-202ENST00000426447 CNTFRP26992 372 aa11.27□□□□□ -0.61
PDAP1-202ENST00000426447 ZNF439Q8NDP4 499 aa11.27□□□□□ -0.61
PDAP1-202ENST00000426447 MRPL48Q96GC5 212 aaKnown RBP11.27□□□□□ -0.61
PDAP1-202ENST00000426447 TMED9Q9BVK6 235 aa11.27□□□□□ -0.61
PDAP1-202ENST00000426447 CST11Q9H112 138 aa11.27□□□□□ -0.61
PDAP1-202ENST00000426447 IFT22Q9H7X7 185 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms