RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 MSRB3Q8IXL7 192 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CMTM1Q8IZ96 169 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 DAW1Q8N136 415 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR6V1Q8N148 313 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 GABRG1Q8N1C3 465 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 ZFP41Q8N8Y5 198 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SUMF2Q8NBJ7 301 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR4F15Q8NGB8 312 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR4K2Q8NGD2 314 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR1J4Q8NGS1 313 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR11L1Q8NGX0 322 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR2T29Q8NH02 315 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR51Q1Q8NH59 317 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR51A7Q8NH64 312 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 C11orf40Q8WZ69 217 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR8D1Q8WZ84 308 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM159Q96B96 161 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PINX1Q96BK5 328 aaKnown RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 RPUSD4Q96CM3 377 aaKnown RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 DNAJA3Q96EY1 480 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PYURFQ96I23 114 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 KCTD7Q96MP8 289 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PRAP1Q96NZ9 151 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR5B2Q96R09 309 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR52E6Q96RD3 313 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 TP53RKQ96S44 253 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CITED2Q99967 270 aaPredicted RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 C20orf144Q9BQM9 153 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 GINS4Q9BRT9 223 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 THUMPD3Q9BV44 507 aaKnown RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR8D2Q9GZM6 311 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 FXYD6Q9H0Q3 95 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SYT4Q9H2B2 425 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CST9LQ9H4G1 147 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 POMKQ9H5K3 350 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 EXO5Q9H790 373 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 FN3KRPQ9HA64 309 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PLEKHA1Q9HB21 404 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 RHOFQ9HBH0 211 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SLC2A8Q9NY64 477 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 TAS2R5Q9NYW4 299 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 ONECUT1Q9UBC0 465 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PITPNC1Q9UKF7 332 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 UBQLN1Q9UMX0 589 aaKnown RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 TNFSF18Q9UNG2 199 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 EXOSC1Q9Y3B2 195 aaKnown RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 FIS1Q9Y3D6 152 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 KPTNQ9Y664 436 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 ENPP4Q9Y6X5 453 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 VWA8A3KMH1 1905 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 DENND4CQ5VZ89 1909 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 DOCK4Q8N1I0 1966 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 PLXNB3Q9ULL4 1909 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 PLXNA4Q9HCM2 1894 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 TRAV30A0A087WSZ9 112 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 TRAV26-1A0A087WT03 109 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF320A2RRD8 509 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 TVP23AA6NH52 213 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 OR5H14A6NHG9 310 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 F5H5P2 479 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 KLRC4-KLRK1H3BQV0 150 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 M0R129 80 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 TLR4O00206 839 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 BHLHE40O14503 412 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 CDIPTO14735 213 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 ARPC1BO15143 372 aaKnown RBP2.25□□□□□ -2.05
LINC01040-201ENST00000425048 NBR2O15453 112 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 OR1F1O43749 312 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 NME2P1O60361 137 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 OR1I1O60431 355 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 SNAI1O95863 264 aaPredicted RBP2.25□□□□□ -2.05
LINC01040-201ENST00000425048 SLC16A8O95907 504 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 MT-ND4P03905 459 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 CXCL1P09341 107 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 UQCRFS1P1P0C7P4 283 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 TRGC1P0CF51 173 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 PGA3P0DJD8 388 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 SLC25A4P12235 298 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 BCKDHAP12694 445 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 B4GALT1P15291 398 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 CCNOP22674 350 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 GNRHRP30968 328 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 AKT2P31751 481 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 AQP2P41181 271 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 RPL29P47914 159 aaKnown RBP2.25□□□□□ -2.05
LINC01040-201ENST00000425048 POLR2JP52435 117 aaKnown RBP2.25□□□□□ -2.05
LINC01040-201ENST00000425048 BIDP55957 195 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 OR10A3P58181 314 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 TAS2R39P59534 338 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 ST8SIA6P61647 398 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 EIF5AP63241 154 aaKnown RBP2.25□□□□□ -2.05
LINC01040-201ENST00000425048 CRADDP78560 199 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 ST3GAL3Q11203 375 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF235Q14590 738 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 RHEBQ15382 184 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 CEBPEQ15744 281 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 RAB11BQ15907 218 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 TAF9Q16594 264 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 PRSS8Q16651 343 aa2.25□□□□□ -2.05
LINC01040-201ENST00000425048 ZSWIM7Q19AV6 140 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms