RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TMEM133Q9H2Q1 129 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 RIMS4Q9H426 269 aaPredicted RBP7.56□□□□□ -1.2
PDGFC-202ENST00000422544 LINC00574Q9H8X3 128 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 TAF9BQ9HBM6 251 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 DIABLOQ9NR28 239 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 MBNL3Q9NUK0 354 aaKnown RBP7.56□□□□□ -1.2
PDGFC-202ENST00000422544 IDI2-AS1Q9NZ38 188 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 KCNIP1Q9NZI2 227 aa7.56□□□□□ -1.2
PDGFC-202ENST00000422544 RSL24D1Q9UHA3 163 aaKnown RBP7.56□□□□□ -1.2
PDGFC-202ENST00000422544 TRRAPQ9Y4A5 3859 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 TRBV6-6A0A0A6YYG2 114 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 MDFIC2A0A1B0GVS7 189 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 MEIOCA2RUB1 952 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 DPPA5A6NC42 116 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 TMEM235A6NFC5 223 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 SERPINE3A8MV23 424 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 SPINT2O43291 252 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 IGHV3-7P01780 117 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 HBZP02008 142 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 ARG1P05089 322 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 EIF4EP06730 217 aaKnown RBP7.55□□□□□ -1.2
PDGFC-202ENST00000422544 SOX6P35712 828 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 BPIFB3P59826 476 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 MRPS15P82914 257 aaKnown RBP7.55□□□□□ -1.2
PDGFC-202ENST00000422544 DYNC1I2Q13409 638 aaKnown RBP7.55□□□□□ -1.2
PDGFC-202ENST00000422544 ARFRP1Q13795 201 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 ARL6IP1Q15041 203 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 ZNF260Q3ZCT1 412 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 HACD4Q5VWC8 232 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 OR52W1Q6IF63 320 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 FAM53AQ6NSI3 398 aaPredicted RBP7.55□□□□□ -1.2
PDGFC-202ENST00000422544 MZT2AQ6P582 158 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 ZNF880Q6PDB4 577 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 C9orf139Q6ZV77 190 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 ABHD12Q8N2K0 398 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 OR1L1Q8NH94 360 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 C17orf50Q8WW18 174 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 LEAP2Q969E1 77 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 ZNF286AQ9HBT8 521 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 Q9N2K0 584 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 C12orf4Q9NQ89 552 aa7.55□□□□□ -1.2
PDGFC-202ENST00000422544 ZNF230Q9UIE0 474 aaPredicted RBP7.55□□□□□ -1.2
PDGFC-202ENST00000422544 A0A087X0M5 115 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 A0A0A6YYH2 397 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 IGHV2-26A0A0B4J1V2 119 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 IGHV3-43A0A0B4J1X8 118 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 A0A0U1RQK1 487 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 SMIM31A0A1B0GVY4 71 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 A0A1B0GX30 115 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 A6NJ64 397 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 ZNF701M0R085 212 aaPredicted RBP7.54□□□□□ -1.2
PDGFC-202ENST00000422544 SDCBPO00560 298 aaPredicted RBP7.54□□□□□ -1.2
PDGFC-202ENST00000422544 CTDSP2O14595 271 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 XRCC3O43542 346 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 APOA1P02647 267 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 FCGR3AP08637 254 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 GSTP1P09211 210 aaKnown RBP7.54□□□□□ -1.2
PDGFC-202ENST00000422544 IGHV3-43DP0DP04 118 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 PTHLHP12272 177 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 ELK1P19419 428 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 SAA4P35542 130 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 TALDO1P37837 337 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 LOXL3P58215 753 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 SCGB2A2Q13296 93 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 MADCAM1Q13477 382 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 DEFB112Q30KQ8 113 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 TRAT1Q6PIZ9 186 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 SIGLECL1Q8N7X8 197 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 OR11H6Q8NGC7 330 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 OR10A7Q8NGE5 316 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 OR52L2PQ8NGH6 319 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 OR10V1Q8NGI7 309 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 MAFIPQ8WZ33 124 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 CMTM3Q96MX0 182 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 ZNF48Q96MX3 618 aaPredicted RBP7.54□□□□□ -1.2
PDGFC-202ENST00000422544 DCUN1D5Q9BTE7 237 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 CLEC7AQ9BXN2 247 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 AUNIPQ9H7T9 357 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.54□□□□□ -1.2
PDGFC-202ENST00000422544 CCDC59Q9P031 241 aaKnown RBP7.54□□□□□ -1.2
PDGFC-202ENST00000422544 MRPS7Q9Y2R9 242 aaKnown RBP7.54□□□□□ -1.2
PDGFC-202ENST00000422544 FAM96BQ9Y3D0 163 aa7.54□□□□□ -1.2
PDGFC-202ENST00000422544 A0A1W2PPE3 182 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 POM121CA8CG34 1229 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 ODF3BA8MYP8 253 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 FAM25AB3EWG3 89 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 FAM25CB3EWG5 89 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 FAM25GB3EWG6 89 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 TRDCB7Z8K6 153 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 F2RL2O00254 374 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 TOR1AO14656 332 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 SSX5O60225 188 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 MELTFP08582 738 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 SCTP09683 121 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 PAX6P26367 422 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 CD34P28906 385 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 MNDAP41218 407 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 GNG10P50151 68 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 PRRX1P54821 245 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 LGALS4P56470 323 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms