RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SMIM6P0DI80 62 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 IAPPP10997 89 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 CA6P23280 308 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 WNT5AP41221 380 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 UBE2KP61086 200 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 DLK1P80370 383 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 ZNF324BQ6AW86 544 aaPredicted RBP13.44□□□□□ -0.26
CDH1-202ENST00000422392 HEPN1Q6WQI6 88 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 SAXO1Q8IYX7 474 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 MUCL1Q96DR8 90 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 YPEL4Q96NS1 127 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 SEBOXQ9HB31 216 aaPredicted RBP13.44□□□□□ -0.26
CDH1-202ENST00000422392 OR2W1Q9Y3N9 320 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 BOD1L1Q8NFC6 3051 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 B4E171 279 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 PLA2G5P39877 138 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 TSPAN7P41732 249 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 SRSF7Q16629 238 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDH1-202ENST00000422392 SLC25A24Q6NUK1 477 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 ZNF429Q86V71 674 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 OR5A2Q8NGI9 324 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 OR5P3Q8WZ94 311 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 APH1AQ96BI3 265 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 ATP5SQ99766 215 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 FAM173AQ9BQD7 235 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 TTTY12Q9BZ98 90 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 VSIRQ9H7M9 311 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 GSN-AS1Q9NRJ2 163 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 PRSS50Q9UI38 385 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 WSB1Q9Y6I7 421 aa13.44□□□□□ -0.26
CDH1-202ENST00000422392 LAMTOR5O43504 91 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 SS18L1O75177 396 aaPredicted RBP13.43□□□□□ -0.26
CDH1-202ENST00000422392 SYNGR4O95473 234 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 IGKV1-39P01597 117 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 IGKV1D-39P04432 117 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 SERPINE2P07093 398 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 FABP1P07148 127 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 HOXA6P31267 233 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 BAXQ07812 192 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 SP5Q6BEB4 398 aaPredicted RBP13.43□□□□□ -0.26
CDH1-202ENST00000422392 GNPNAT1Q96EK6 184 aaPredicted RBP13.43□□□□□ -0.26
CDH1-202ENST00000422392 DLL3Q9NYJ7 618 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 PPP1R3CQ9UQK1 317 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 AP4M1O00189 453 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 YIF1AO95070 293 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 CXCL1P09341 107 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 ZNF16P17020 682 aaPredicted RBP13.43□□□□□ -0.26
CDH1-202ENST00000422392 RPL23AP62750 156 aaKnown RBP13.43□□□□□ -0.26
CDH1-202ENST00000422392 S100A12P80511 92 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 FAM180AQ6UWF9 173 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 FAM58AQ8N1B3 248 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 CLDND2Q8NHS1 167 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 BCL2L14Q9BZR8 327 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 FOXJ2Q9P0K8 574 aa13.43□□□□□ -0.26
CDH1-202ENST00000422392 DUXBA0A1W2PPF3 345 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 TAS2R30P59541 319 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 ERVFRD-1P60508 538 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 HNF4GQ14541 408 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 OR1C1Q15619 314 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 ABHD17BQ5VST6 288 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 STX12Q86Y82 276 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 Q8WTZ3 238 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 MALSU1Q96EH3 234 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 CACNG5Q9UF02 275 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 ANKRD30BLA7E2S9 258 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 KIAA1324LA8MWY0 1029 aaPredicted RBP13.42□□□□□ -0.26
CDH1-202ENST00000422392 IGLV2-14P01704 120 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 CTXN2P0C2S0 81 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 FGF8P55075 233 aaPredicted RBP13.42□□□□□ -0.26
CDH1-202ENST00000422392 HLA-DRB3P79483 266 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 ARL16Q0P5N6 197 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 PEAR1Q5VY43 1037 aaPredicted RBP13.42□□□□□ -0.26
CDH1-202ENST00000422392 H1FOOQ8IZA3 346 aaPredicted RBP13.42□□□□□ -0.26
CDH1-202ENST00000422392 TMEM251Q8N6I4 163 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 OR1K1Q8NGR3 316 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 POM121Q96HA1 1249 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 ABHD14BQ96IU4 210 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 ZNF251Q9BRH9 671 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 GNG13Q9P2W3 67 aa13.42□□□□□ -0.26
CDH1-202ENST00000422392 C9orf172C9J069 976 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 SIRPB1O00241 398 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 METTL15P1P0C7V9 234 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 SELEP16581 610 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 IL24Q13007 206 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 SMDT1Q9H4I9 107 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 TECTAO75443 2155 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 TGIF2-C20orf24A0A0A6YYL0 155 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 A0A1W2PR80 420 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 ZFP92A6NM28 416 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 PLGLB1Q02325 96 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 TLE4Q04727 773 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 PLP2Q04941 152 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 KIAA0141Q14154 515 aaPredicted RBP13.41□□□□□ -0.26
CDH1-202ENST00000422392 ELOBQ15370 118 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 SSX7Q7RTT5 188 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 UBALD2Q8IYN6 164 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 OR8G5Q8NG78 346 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 B4GALT7Q9UBV7 327 aa13.41□□□□□ -0.26
CDH1-202ENST00000422392 BTBD17A6NE02 478 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 PPIHO43447 177 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms