RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 ZNF596Q8TC21 504 aa16.75■□□□□ 0.27
HMGXB4-203ENST00000420166 HDHD3Q9BSH5 251 aaPredicted RBP16.75■□□□□ 0.27
HMGXB4-203ENST00000420166 TAF9BQ9HBM6 251 aa16.75■□□□□ 0.27
HMGXB4-203ENST00000420166 C12orf4Q9NQ89 552 aa16.75■□□□□ 0.27
HMGXB4-203ENST00000420166 KCNIP1Q9NZI2 227 aa16.75■□□□□ 0.27
HMGXB4-203ENST00000420166 SPATA2Q9UM82 520 aa16.75■□□□□ 0.27
HMGXB4-203ENST00000420166 CUBNO60494 3623 aa16.75■□□□□ 0.27
HMGXB4-203ENST00000420166 F2RL2O00254 374 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 HOXA3O43365 443 aaPredicted RBP16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 SCGNO76038 276 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 IGLV1-47P01700 117 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 HBZP02008 142 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 GNB3P16520 340 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 UBA52P62987 128 aaKnown RBP16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 TMEM30BQ3MIR4 351 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 LDLRAD2Q5SZI1 272 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 MINOS1Q5TGZ0 78 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 ZNF880Q6PDB4 577 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 BEND2Q8NDZ0 799 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 OR52M1Q8NGK5 317 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 OR4P4Q8NGL7 312 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 OR1L1Q8NH94 360 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 NDNFQ8TB73 568 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 DUX5Q96PT3 197 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 CMSS1Q9BQ75 279 aaKnown RBP16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 MINOS1-NBL1R4GNA1 71 aa16.74■□□□□ 0.27
HMGXB4-203ENST00000420166 CLDN34H7C241 214 aa16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 TRIM77I1YAP6 450 aa16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 SDCBPO00560 298 aaPredicted RBP16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 LOXL3P58215 753 aa16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 SLC9A3R2Q15599 337 aa16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 HMGN3Q15651 99 aa16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 PRR18Q8N4B5 295 aa16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 OR9G1Q8NH87 305 aa16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 ZFAND2BQ8WV99 257 aa16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 SSMEM1Q8WWF3 244 aa16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 LEAP2Q969E1 77 aa16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 KCTD12Q96CX2 325 aaKnown RBP16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 DCSTAMPQ9H295 470 aa16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 ZMAT3Q9HA38 289 aaKnown RBP16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 GFOD1Q9NXC2 390 aa16.73■□□□□ 0.27
HMGXB4-203ENST00000420166 A0A075B6Q4 140 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 SERPINE3A8MV23 424 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 TOR1AO14656 332 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 IGHV3-7P01780 117 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 IGHV4-59P01825 116 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 CD3GP09693 182 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 HTR1DP28221 377 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 IER3P46695 156 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 PRRX1P54821 245 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 ARL6IP1Q15041 203 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 HLA-DRB5Q30154 266 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 KRTAP24-1Q3LI83 254 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 TMEM86BQ8N661 226 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 SETD6Q8TBK2 473 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 RAB2BQ8WUD1 216 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 MALSU1Q96EH3 234 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 BCL7BQ9BQE9 202 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 MEGF9Q9H1U4 602 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 PSG11Q9UQ72 335 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 POMT1Q9Y6A1 747 aa16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 FBN1P35555 2871 aaKnown RBP16.72■□□□□ 0.27
HMGXB4-203ENST00000420166 IGHV3-43A0A0B4J1X8 118 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 POM121CA8CG34 1229 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 J3QR06 171 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 IGHV3-43DP0DP04 118 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 PAX6P26367 422 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 GNG10P50151 68 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 RORCP51449 518 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 TMBIM6P55061 237 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 MRPS15P82914 257 aaKnown RBP16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 C5orf24Q7Z6I8 188 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 DYNAPQ8N1N2 210 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 MMP28Q9H239 520 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 DPAGT1Q9H3H5 408 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 Q9N2K0 584 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 GNG12Q9UBI6 72 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 MGAT4AQ9UM21 535 aa16.71■□□□□ 0.27
HMGXB4-203ENST00000420166 RNASE1P07998 156 aaKnown RBP16.7■□□□□ 0.26
HMGXB4-203ENST00000420166 SSX2Q16385 188 aa16.7■□□□□ 0.26
HMGXB4-203ENST00000420166 CDNFQ49AH0 187 aa16.7■□□□□ 0.26
HMGXB4-203ENST00000420166 FAM53AQ6NSI3 398 aaPredicted RBP16.7■□□□□ 0.26
HMGXB4-203ENST00000420166 PHF21AQ96BD5 680 aa16.7■□□□□ 0.26
HMGXB4-203ENST00000420166 ABCG5Q9H222 651 aa16.7■□□□□ 0.26
HMGXB4-203ENST00000420166 DPM3Q9P2X0 92 aa16.7■□□□□ 0.26
HMGXB4-203ENST00000420166 COL6A5A8TX70 2615 aa16.7■□□□□ 0.26
HMGXB4-203ENST00000420166 A0A0A6YYH2 397 aa16.69■□□□□ 0.26
HMGXB4-203ENST00000420166 A6NJ64 397 aa16.69■□□□□ 0.26
HMGXB4-203ENST00000420166 BUB1B-PAK6H3BSN5 160 aa16.69■□□□□ 0.26
HMGXB4-203ENST00000420166 FCGR3AP08637 254 aa16.69■□□□□ 0.26
HMGXB4-203ENST00000420166 GSTP1P09211 210 aaKnown RBP16.69■□□□□ 0.26
HMGXB4-203ENST00000420166 HLA-DRB3P79483 266 aa16.69■□□□□ 0.26
HMGXB4-203ENST00000420166 HTD2P86397 168 aa16.69■□□□□ 0.26
HMGXB4-203ENST00000420166 ARFRP1Q13795 201 aa16.69■□□□□ 0.26
HMGXB4-203ENST00000420166 SPCS2Q15005 226 aa16.69■□□□□ 0.26
HMGXB4-203ENST00000420166 AANATQ16613 207 aa16.69■□□□□ 0.26
HMGXB4-203ENST00000420166 LRRC75BQ2VPJ9 315 aa16.69■□□□□ 0.26
HMGXB4-203ENST00000420166 Q3ZCU0 254 aa16.69■□□□□ 0.26
HMGXB4-203ENST00000420166 UBE2NLQ5JXB2 153 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms