RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 COX19Q49B96 90 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 SLC22A6Q4U2R8 563 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 CT45A2Q5DJT8 189 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 SLC25A30Q5SVS4 291 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 TMEM69Q5SWH9 247 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 GLT8D1Q68CQ7 371 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 ASPHD2Q6ICH7 369 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 OR4A47Q6IF82 309 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 PRR27Q6MZM9 219 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 RPL22L1Q6P5R6 122 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 LEG1Q6P5S2 330 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 B3GLCTQ6Y288 498 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 NIT1Q86X76 327 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 RBM45Q8IUH3 476 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 LRRC25Q8N386 305 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 CSNK1A1LQ8N752 337 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 OR2T12Q8NG77 320 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 EEF1AKMT1Q8WVE0 214 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 TSLPQ969D9 159 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 TMEM106AQ96A25 262 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 TMEM18Q96B42 140 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 PINX1Q96BK5 328 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 IL4I1Q96RQ9 567 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 PEBP4Q96S96 227 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 ATOH8Q96SQ7 321 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 NICN1Q9BSH3 213 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 ABHD14AQ9BUJ0 271 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 SELENOIQ9C0D9 397 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 FXYD6Q9H0Q3 95 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 RAB1BQ9H0U4 201 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 RHOJQ9H4E5 214 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 NOX4Q9NPH5 578 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 RPS10P5Q9NQ39 176 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 PARP11Q9NR21 331 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 TMEM242Q9NWH2 141 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 CLN6Q9NWW5 311 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 ZNF223Q9UK11 482 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 FBXW2Q9UKT8 454 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 PLAGL1Q9UM63 463 aa4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 BOKQ9UMX3 212 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 YARS2Q9Y2Z4 477 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-206ENST00000417628 TRBV24-1A0A075B6N3 115 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 TRBV6-7A0A0A0MS04 114 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 LRP5LA4QPB2 252 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 OR6C76A6NM76 312 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 ZNF705EA8MWA4 302 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 B4DEV8 164 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 ANKRD66B4E2M5 251 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 RNASEK-C17orf49H0YIS7 233 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 MANBAO00462 879 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 ARPC3O15145 178 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 ENTPD6O75354 484 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 RBMXL2O75526 392 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 NDUFB6O95139 128 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 LRATO95237 230 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 HLA-DPB1P04440 258 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 FABP3P05413 133 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 CHRM4P08173 479 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 FCGR3AP08637 254 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 OR13C7P0DN81 318 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 CD37P11049 281 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 GZMHP20718 246 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 DRD5P21918 477 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 PRTN3P24158 256 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 F2RP25116 425 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 CMPK1P30085 196 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 SNCAP37840 140 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 BUD31P41223 144 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 SOX3P41225 446 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 LGALS7P47929 136 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 SLC6A8P48029 635 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 RND2P52198 227 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 CRYBA4P53673 196 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 RPS23P62266 143 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 RPS13P62277 151 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 SLC25A11Q02978 314 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 RAB31Q13636 194 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 CRMP1Q14194 572 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 IL13RA2Q14627 380 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 SYPL1Q16563 259 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 TMEM183BQ1AE95 376 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 C18orf21Q32NC0 220 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 CEACAM21Q3KPI0 293 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 DMRTC1Q5HYR2 192 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 C22orf42Q6IC83 251 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 C11orf71Q6IPW1 123 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 ZNF549Q6P9A3 640 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 TEX43Q6ZNM6 134 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 MBOAT2Q6ZWT7 520 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 TMPRSS11BQ86T26 416 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 CALHM3Q86XJ0 350 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 HS3ST5Q8IZT8 346 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 GBGT1Q8N5D6 347 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 COX18Q8N8Q8 333 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 CNEP1R1Q8N9A8 125 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 GATSQ8NAP1 163 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 NHLRC2Q8NBF2 726 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 LFNGQ8NES3 379 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 OR8G5Q8NG78 346 aa4.62□□□□□ -1.67
ECHDC1-206ENST00000417628 OR2AK2Q8NG84 335 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms