RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 IGHV1OR21-1A0A087WYE8 117 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 A0A1W2PQF6 199 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 C2CD4DB7Z1M9 353 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 FAM87AP0C7U9 286 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 SLC35B1P78383 322 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 OR5D13Q8NGL4 314 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 Q9N2K0 584 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 TMEM9BQ9NQ34 198 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 GPR132Q9UNW8 380 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 A0A1W2PRD5 423 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 A0A1W2PRF3 423 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 A0A1W2PRM7 423 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 NCBP2LA6PVI3 153 aaKnown RBP11.27□□□□□ -0.61
SCN1B-202ENST00000415950 ZNF785A8K8V0 405 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 EWSR1Q01844 656 aaKnown RBP eCLIP11.27□□□□□ -0.61
SCN1B-202ENST00000415950 OR1C1Q15619 314 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 ARTNQ5T4W7 220 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 LRRC75AQ8NAA5 344 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 VN1R17PQ8TDU5 208 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 TREM2Q9NZC2 230 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 RNF222A6NCQ9 220 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 FAM157AC9JC47 383 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 TNFSF14O43557 240 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 ISXQ2M1V0 245 aa11.27□□□□□ -0.61
SCN1B-202ENST00000415950 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.61
SCN1B-202ENST00000415950 ZNF385AQ96PM9 386 aaKnown RBP11.27□□□□□ -0.61
SCN1B-202ENST00000415950 TRGV5A0A0B4J1U4 118 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 SRFP11831 508 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 RHOBP62745 196 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
SCN1B-202ENST00000415950 UBE2ZQ9H832 354 aaPredicted RBP11.26□□□□□ -0.61
SCN1B-202ENST00000415950 NAT8Q9UHE5 227 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 ZNF646O15015 1829 aaPredicted RBP11.26□□□□□ -0.61
SCN1B-202ENST00000415950 DOCK4Q8N1I0 1966 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 TTC28Q96AY4 2481 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 TEX50A0A1B0GTY4 177 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 HRASP01112 189 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 CXorf66Q5JRM2 361 aaPredicted RBP11.26□□□□□ -0.61
SCN1B-202ENST00000415950 ACER2Q5QJU3 275 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 KMT5CQ86Y97 462 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 OR2M7Q8NG81 312 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 TM4SF19Q96DZ7 209 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 SLC45A2Q9UMX9 530 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 TRBV5-7A0A0A0MS05 114 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 LIPT2A6NK58 231 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 CDIPTO14735 213 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 HYAL1Q12794 435 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 HIST1H2BAQ96A08 127 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 STARD4Q96DR4 205 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 OCIAD1Q9NX40 245 aa11.26□□□□□ -0.61
SCN1B-202ENST00000415950 ZNF236Q9UL36 1845 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 IER3P46695 156 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 COTL1Q14019 142 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 UBE2V2Q15819 145 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 OR4P4Q8NGL7 312 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 LRRC29Q8WV35 223 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 CCL17Q92583 94 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 RSG1Q9BU20 258 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 TMEM147Q9BVK8 224 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 SLC7A10Q9NS82 523 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 TRGV8A0A0C4DH27 118 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 M0R2Z0 102 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 RNF224P0DH78 156 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 CD40P25942 277 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 PNRC1Q12796 327 aaPredicted RBP11.25□□□□□ -0.61
SCN1B-202ENST00000415950 HOGA1Q86XE5 327 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 GFI1Q99684 422 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.25□□□□□ -0.61
SCN1B-202ENST00000415950 CXorf65A6NEN9 183 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 DHRS7CA6NNS2 312 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 APELAP0DMC3 54 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 EFNB1P98172 346 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 PSG5Q15238 335 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 C3AR1Q16581 482 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 ANKRD37Q7Z713 158 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 TMEM140Q9NV12 185 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 FAM157CP0CG43 387 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 SULT1A2P50226 295 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 FHL5Q5TD97 284 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 CDCP2Q5VXM1 449 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 NSUN5P2Q63ZY6 315 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 C1QL2Q7Z5L3 287 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 ZNF488Q96MN9 340 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 RNF24Q9Y225 148 aa11.25□□□□□ -0.61
SCN1B-202ENST00000415950 SBF1O95248 1867 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 IGLV1-36A0A0B4J1U3 117 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 OR5H1A6NKK0 313 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 MBPP02686 304 aaPredicted RBP11.24□□□□□ -0.61
SCN1B-202ENST00000415950 COX7A1P24310 79 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 P2RY1P47900 373 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 HLA-DRB5Q30154 266 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 NHLRC2Q8NBF2 726 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 PARP11Q9NR21 331 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 MYLKQ15746 1914 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 IGKV1D-43A0A0B4J1Z2 117 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 PRSS1P07477 247 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 VMA21Q3ZAQ7 101 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 LY6G6FQ5SQ64 297 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 DHRS13Q6UX07 377 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 MOB1BQ7L9L4 216 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms