RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 TMEM211Q6ICI0 200 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 TMPRSS7Q7RTY8 843 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 C1orf87Q8N0U7 546 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 GTF3AQ92664 365 aaKnown RBP12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 SEMA5BQ9P283 1151 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 CACNA1EQ15878 2313 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 CLDN15P56746 228 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 MLF1P58340 268 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 SPINK9Q5DT21 86 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 SPANXN5Q5MJ07 72 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 Q6ZSR3 168 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 HLA-CQ95604 372 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 RCC1LQ96I51 464 aaKnown RBP12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 SGCZQ96LD1 299 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 PRRG4Q9BZD6 226 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 OPA3Q9H6K4 179 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 ZNF552Q9H707 407 aaPredicted RBP12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 LAMP3Q9UQV4 416 aa12.45□□□□□ -0.42
SEMA3F-202ENST00000413852 AHCTF1Q8WYP5 2266 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 A0A087WWC5 75 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 PTBP3O95758 552 aaKnown RBP12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 IGKV1D-33P01593 117 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 IGKV1-33P01594 117 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 MMP7P09237 267 aaPredicted RBP12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 VDAC1P21796 283 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 PRDX4Q13162 271 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 TMEM37Q8WXS4 190 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 A0A1B0GU03 582 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 BCL2P10415 239 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 ZXDAP98168 799 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 C16orf82Q7Z2V1 217 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 SLC35E3Q7Z769 313 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 RBMXL1Q96E39 390 aaKnown RBP12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 GNPNAT1Q96EK6 184 aaPredicted RBP12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 OR14J1Q9UGF5 321 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 GTF3C1Q12789 2109 aa12.44□□□□□ -0.42
SEMA3F-202ENST00000413852 ZNF816-ZNF321PA0A0X1KG74 233 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 SMCO3A2RU48 225 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 C5orf49A4QMS7 147 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 SELEP16581 610 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 DSCR4P56555 118 aaPredicted RBP12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 CFAP47Q6ZTR5 3102 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 DNAJC13O75165 2243 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 UBE2L5PA0A1B0GUS4 154 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 CLDN34H7C241 214 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 IFNA5P01569 189 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 AMBPP02760 352 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 UCP1P25874 307 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 SPATA46Q5T0L3 261 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 STX12Q86Y82 276 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 ZNF664Q8N3J9 261 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 OR10D3Q8NH80 312 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 SPIN2AQ99865 258 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 SPIN2BQ9BPZ2 258 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 SLC25A22Q9H936 323 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 SOX15O60248 233 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 SERPINE2P07093 398 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 LINC00205P59089 165 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 EIF3IQ13347 325 aaKnown RBP12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 WDR5BQ86VZ2 330 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 C10orf35Q96D05 121 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 PCGF1Q9BSM1 259 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 SDF2L1Q9HCN8 221 aa12.43□□□□□ -0.42
SEMA3F-202ENST00000413852 LY6G6EA0A0G2JKS1 128 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 ZNF716A6NP11 495 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 RHBDL1O75783 438 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 TFF1P04155 84 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 GZMBP10144 247 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 CD33P20138 364 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 PCSK4Q6UW60 755 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 GPR35Q9HC97 309 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 U3KQA8 63 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 IGHV1-45A0A0A0MS14 117 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 PINLYPA6NC86 204 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 CST2P09228 141 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 PMP22Q01453 160 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 MRPL14Q6P1L8 145 aaKnown RBP12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 REC114Q7Z4M0 266 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 GGNQ86UU5 652 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 KMT5CQ86Y97 462 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 TGIF2LXQ8IUE1 241 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 SCGB1C1Q8TD33 95 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 OR4C12Q96R67 309 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 PSENENQ9NZ42 101 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 RNF150Q9ULK6 438 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 KCNS2Q9ULS6 477 aa12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 SMG1Q96Q15 3661 aaKnown RBP12.42□□□□□ -0.42
SEMA3F-202ENST00000413852 A0A1W2PPQ1 181 aa12.41□□□□□ -0.42
SEMA3F-202ENST00000413852 F2RP25116 425 aa12.41□□□□□ -0.42
SEMA3F-202ENST00000413852 SSR4P51571 173 aa12.41□□□□□ -0.42
SEMA3F-202ENST00000413852 B3GALT5-AS1P59052 145 aa12.41□□□□□ -0.42
SEMA3F-202ENST00000413852 RAC1P63000 192 aa12.41□□□□□ -0.42
SEMA3F-202ENST00000413852 LILRB2Q8N423 598 aa12.41□□□□□ -0.42
SEMA3F-202ENST00000413852 PRDM6Q9NQX0 595 aa12.41□□□□□ -0.42
SEMA3F-202ENST00000413852 RBM7Q9Y580 266 aaKnown RBP12.41□□□□□ -0.42
SEMA3F-202ENST00000413852 DOCK10Q96BY6 2186 aa12.41□□□□□ -0.42
SEMA3F-202ENST00000413852 LRRC3CA6NJW4 275 aa12.41□□□□□ -0.42
SEMA3F-202ENST00000413852 WDR1O75083 606 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms