RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 B3GALNT1O75752 331 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 RHBDL1O75783 438 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 CCKARP32238 428 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 SPIN3Q5JUX0 258 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 CLLU1Q5K131 121 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 Q6P435 159 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 ZNF474Q6S9Z5 364 aaPredicted RBP14.38□□□□□ -0.11
PTPRC-206ENST00000413409 FIP1L1Q6UN15 594 aaKnown RBP14.38□□□□□ -0.11
PTPRC-206ENST00000413409 ZNF546Q86UE3 836 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 FAM185AQ8N0U4 392 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 KCNRGQ8N5I3 272 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 CCDC71LQ8N9Z2 235 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 POC1AQ8NBT0 407 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 THAP6Q8TBB0 222 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 MRPL30Q8TCC3 161 aaKnown RBP14.38□□□□□ -0.11
PTPRC-206ENST00000413409 NEK7Q8TDX7 302 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 VRK1Q99986 396 aaPredicted RBP14.38□□□□□ -0.11
PTPRC-206ENST00000413409 RSRP1Q9BUV0 290 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 PIGMQ9H3S5 423 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 ATP23Q9Y6H3 246 aa14.38□□□□□ -0.11
PTPRC-206ENST00000413409 LINC00862A6NCI5 91 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 TRDCB7Z8K6 153 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 MLNRO43193 412 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 TIMM8AO60220 97 aaPredicted RBP14.37□□□□□ -0.11
PTPRC-206ENST00000413409 KNG1P01042 644 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 PPYP01298 95 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 AADACP22760 399 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 PSMB6P28072 239 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 NAAAQ02083 359 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 MZT1Q08AG7 82 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 ZNF146Q15072 292 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 ALKBH6Q3KRA9 238 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 ABCA11PQ4W5N1 156 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 SLC51BQ86UW2 128 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 TOMM40LQ969M1 308 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 SEC22AQ96IW7 307 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 C2orf50Q96LR7 162 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 SUCNR1Q9BXA5 334 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 C1QTNF6Q9BXI9 259 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 HES4Q9HCC6 221 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 CDC42EP3Q9UKI2 254 aa14.37□□□□□ -0.11
PTPRC-206ENST00000413409 TEX13DA0A0J9YY54 714 aaPredicted RBP14.36□□□□□ -0.11
PTPRC-206ENST00000413409 RPS10-NUDT3A0A1W2PQS6 291 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 TUSC2O75896 110 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 DIRAS3O95661 229 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 PLAUP00749 431 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 TK1P04183 234 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 LYL1P12980 280 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 GCH1P30793 250 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 PIGPP57054 158 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 RND3P61587 244 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 UBA52P62987 128 aaKnown RBP14.36□□□□□ -0.11
PTPRC-206ENST00000413409 HLA-DRB3P79483 266 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 ACOT7LQ6ZUV0 252 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 GAPTQ8N292 157 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 LRTM2Q8N967 370 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 SYT3Q9BQG1 590 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 CABLES2Q9BTV7 478 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 RDH8Q9NYR8 311 aa14.36□□□□□ -0.11
PTPRC-206ENST00000413409 RNF222A6NCQ9 220 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 NPIPB11E5RHQ5 1161 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 DEGS1O15121 323 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 BCL2L11O43521 198 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 NXPH2O95156 264 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 CFDP00746 253 aaPredicted RBP14.35□□□□□ -0.11
PTPRC-206ENST00000413409 PET100P0DJ07 73 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 OR4A4PQ8NGN8 299 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 RTN4IP1Q8WWV3 396 aaPredicted RBP14.35□□□□□ -0.11
PTPRC-206ENST00000413409 S100PBPQ96BU1 408 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 USB1Q9BQ65 265 aaKnown RBP14.35□□□□□ -0.11
PTPRC-206ENST00000413409 SLC2A9Q9NRM0 540 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 RASL12Q9NYN1 266 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 MBD2Q9UBB5 411 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 KCNIP3Q9Y2W7 256 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 AUP1Q9Y679 476 aa14.35□□□□□ -0.11
PTPRC-206ENST00000413409 C13orf42A0A1B0GVH6 325 aa14.34□□□□□ -0.11
PTPRC-206ENST00000413409 ADAP1O75689 374 aa14.34□□□□□ -0.11
PTPRC-206ENST00000413409 ZNF44P15621 663 aa14.34□□□□□ -0.11
PTPRC-206ENST00000413409 DUSP1P28562 367 aa14.34□□□□□ -0.11
PTPRC-206ENST00000413409 FXYD4P59646 89 aa14.34□□□□□ -0.11
PTPRC-206ENST00000413409 SRPXP78539 464 aa14.34□□□□□ -0.11
PTPRC-206ENST00000413409 IL15RAQ13261 267 aa14.34□□□□□ -0.11
PTPRC-206ENST00000413409 TMEM187Q14656 261 aa14.34□□□□□ -0.11
PTPRC-206ENST00000413409 PAN3Q58A45 887 aaKnown RBP14.34□□□□□ -0.11
PTPRC-206ENST00000413409 RGS7BPQ6MZT1 257 aaPredicted RBP14.34□□□□□ -0.11
PTPRC-206ENST00000413409 OR8H3Q8N146 312 aa14.34□□□□□ -0.11
PTPRC-206ENST00000413409 METTL8Q9H825 291 aaKnown RBP14.34□□□□□ -0.11
PTPRC-206ENST00000413409 SPEF1Q9Y4P9 236 aa14.34□□□□□ -0.11
PTPRC-206ENST00000413409 KANTRA0A1W2PQU2 76 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 H0YL77 283 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 SLC33A1O00400 549 aaPredicted RBP14.33□□□□□ -0.12
PTPRC-206ENST00000413409 CDIPTO14735 213 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 SH2D1BO14796 132 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 OR2H2O95918 312 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 IFNA21P01568 189 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 RAB14P61106 215 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 HERPUD1Q15011 391 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 LRRC37A5PQ49AS3 106 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 IGSF11Q5DX21 431 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 PRSS54Q6PEW0 395 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms