RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 TRAT1Q6PIZ9 186 aa11.32□□□□□ -0.6
CPNE1-206ENST00000412056 LDLRAD3Q86YD5 345 aa11.32□□□□□ -0.6
CPNE1-206ENST00000412056 PRR18Q8N4B5 295 aa11.32□□□□□ -0.6
CPNE1-206ENST00000412056 OR10A7Q8NGE5 316 aa11.32□□□□□ -0.6
CPNE1-206ENST00000412056 SETD6Q8TBK2 473 aa11.32□□□□□ -0.6
CPNE1-206ENST00000412056 JMJD8Q96S16 334 aa11.32□□□□□ -0.6
CPNE1-206ENST00000412056 CMSS1Q9BQ75 279 aaKnown RBP11.32□□□□□ -0.6
CPNE1-206ENST00000412056 TAF9BQ9HBM6 251 aa11.32□□□□□ -0.6
CPNE1-206ENST00000412056 ABRACLQ9P1F3 81 aa11.32□□□□□ -0.6
CPNE1-206ENST00000412056 TBL2Q9Y4P3 447 aaKnown RBP11.32□□□□□ -0.6
CPNE1-206ENST00000412056 NF1P21359 2839 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 MXRA5Q9NR99 2828 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 TRBV6-6A0A0A6YYG2 114 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 F2RL2O00254 374 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 SDCBPO00560 298 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-206ENST00000412056 SPINT2O43291 252 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 HOXA3O43365 443 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-206ENST00000412056 TMEM127O75204 238 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 GNG10P50151 68 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 LOXL3P58215 753 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 UBA52P62987 128 aaKnown RBP11.31□□□□□ -0.6
CPNE1-206ENST00000412056 SPCS2Q15005 226 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 HMGN3Q15651 99 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 HLA-DRB5Q30154 266 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 MOB1BQ7L9L4 216 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 DYNAPQ8N1N2 210 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 OR4P4Q8NGL7 312 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 C12orf4Q9NQ89 552 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 TNFRSF19Q9NS68 423 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 GFOD1Q9NXC2 390 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 KCNIP1Q9NZI2 227 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 ELF5Q9UKW6 265 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-206ENST00000412056 PSG11Q9UQ72 335 aa11.31□□□□□ -0.6
CPNE1-206ENST00000412056 TOR1AO14656 332 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 IGLV1-47P01700 117 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 IGHV4-59P01825 116 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 CD3GP09693 182 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 TMBIM6P55061 237 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 SLC9A3R2Q15599 337 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 KRTAP24-1Q3LI83 254 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 ZNF554Q86TJ5 538 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 BEND2Q8NDZ0 799 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 OR9G1Q8NH87 305 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 ZNF596Q8TC21 504 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 RAB2BQ8WUD1 216 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 KCTD12Q96CX2 325 aaKnown RBP11.3□□□□□ -0.6
CPNE1-206ENST00000412056 RIMS4Q9H426 269 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-206ENST00000412056 Q9N2K0 584 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 RAB9BQ9NP90 201 aa11.3□□□□□ -0.6
CPNE1-206ENST00000412056 A0A1W2PPE3 182 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 SERPINE3A8MV23 424 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 TRIM77I1YAP6 450 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 J3QR06 171 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 SCGNO76038 276 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 HTR1DP28221 377 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 IER3P46695 156 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 RORCP51449 518 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 HLA-DRB3P79483 266 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 ARFRP1Q13795 201 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 GNMTQ14749 295 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 ZNF260Q3ZCT1 412 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 CDNFQ49AH0 187 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 PLA1AQ53H76 456 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 MINOS1Q5TGZ0 78 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 IZUMO1Q8IYV9 350 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 SAMD12Q8N8I0 201 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 OR52L2PQ8NGH6 319 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 OR10V1Q8NGI7 309 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 OR52M1Q8NGK5 317 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 SSMEM1Q8WWF3 244 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 MMP28Q9H239 520 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.29□□□□□ -0.61e-7■■■■□ 24.8
CPNE1-206ENST00000412056 GNG12Q9UBI6 72 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 HILPDAQ9Y5L2 63 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 MINOS1-NBL1R4GNA1 71 aa11.29□□□□□ -0.6
CPNE1-206ENST00000412056 ZFHX3Q15911 3703 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 TMEM235A6NFC5 223 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 SLC31A2O15432 143 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 NOL3O60936 208 aaKnown RBP11.28□□□□□ -0.6
CPNE1-206ENST00000412056 FCGR3AP08637 254 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 PRRX1P54821 245 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 MRPS15P82914 257 aaKnown RBP11.28□□□□□ -0.6
CPNE1-206ENST00000412056 SSX2Q16385 188 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 KRTAP21-3Q3LHN1 58 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 TMEM30BQ3MIR4 351 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 UBE2NLQ5JXB2 153 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-206ENST00000412056 DTX3Q8N9I9 347 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 NUDCD2Q8WVJ2 157 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 MAFIPQ8WZ33 124 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 PHF21AQ96BD5 680 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 ISOC1Q96CN7 298 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 MALSU1Q96EH3 234 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 BCL7BQ9BQE9 202 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 MEGF9Q9H1U4 602 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 ABCG5Q9H222 651 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 CEPT1Q9Y6K0 416 aa11.28□□□□□ -0.6
CPNE1-206ENST00000412056 SVEP1Q4LDE5 3571 aa11.27□□□□□ -0.6
CPNE1-206ENST00000412056 TRAV18A0A075B6X5 111 aa11.27□□□□□ -0.61
CPNE1-206ENST00000412056 H3BMQ9 156 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms