RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 SULT4A1Q9BR01 284 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 MBNL3Q9NUK0 354 aaKnown RBP16.73■□□□□ 0.27
VSX1-204ENST00000409958 SSR3Q9UNL2 185 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 AMMECR1Q9Y4X0 333 aaPredicted RBP16.73■□□□□ 0.27
VSX1-204ENST00000409958 A0A0A6YYD4 124 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 IFITM5A6NNB3 132 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 C12orf77C9JDV5 145 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 LY6LH3BQJ8 138 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 F2RL2O00254 374 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 LDLRAD4O15165 306 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 SPINT2O43291 252 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 TMEM30BQ3MIR4 351 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 TPTE2P1Q5T6R2 138 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 OLFML2AQ68BL7 652 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 ZNF554Q86TJ5 538 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 MRPL30Q8TCC3 161 aaKnown RBP16.72■□□□□ 0.27
VSX1-204ENST00000409958 FAAP24Q9BTP7 215 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 C16orf95Q9H693 158 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 GFOD1Q9NXC2 390 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 PITPNC1Q9UKF7 332 aa16.72■□□□□ 0.27
VSX1-204ENST00000409958 A6NDX4 124 aa16.71■□□□□ 0.27
VSX1-204ENST00000409958 OOSP1A8MZH6 123 aa16.71■□□□□ 0.27
VSX1-204ENST00000409958 SDCBPO00560 298 aaPredicted RBP16.71■□□□□ 0.27
VSX1-204ENST00000409958 IGHV3-7P01780 117 aa16.71■□□□□ 0.27
VSX1-204ENST00000409958 JUNBP17275 347 aaPredicted RBP16.71■□□□□ 0.27
VSX1-204ENST00000409958 RCC1P18754 421 aaPredicted RBP16.71■□□□□ 0.27
VSX1-204ENST00000409958 ARHGDIBP52566 201 aa16.71■□□□□ 0.27
VSX1-204ENST00000409958 LOXL3P58215 753 aa16.71■□□□□ 0.27
VSX1-204ENST00000409958 LINC01006Q8NI28 216 aa16.71■□□□□ 0.27
VSX1-204ENST00000409958 UBALD1Q8TB05 177 aa16.71■□□□□ 0.27
VSX1-204ENST00000409958 PLEKHJ1Q9NW61 149 aa16.71■□□□□ 0.27
VSX1-204ENST00000409958 RAB22AQ9UL26 194 aa16.71■□□□□ 0.27
VSX1-204ENST00000409958 A0A087WXM4 84 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 TMEM272A0A1B0GTI8 110 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 FOXI3A8MTJ6 420 aaPredicted RBP16.7■□□□□ 0.26
VSX1-204ENST00000409958 SOCS1O15524 211 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 Q3ZCU0 254 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 CCDC144NLQ6NUI1 221 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 SHISA2Q6UWI4 295 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 CCBE1Q6UXH8 406 aaPredicted RBP16.7■□□□□ 0.26
VSX1-204ENST00000409958 TPRA1Q86W33 373 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 TSPAN14Q8NG11 270 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 OR51E2Q9H255 320 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 KCNIP1Q9NZI2 227 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 HSF4Q9ULV5 492 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 CHST1O43916 411 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 HBZP02008 142 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 CD36P16671 472 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 BRS3P32247 399 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 GNG10P50151 68 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 MADCAM1Q13477 382 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 NR2C2APQ86WQ0 139 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 LINC00311Q8N616 119 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 C8orf31Q8N9H6 132 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 OR56B1Q8NGI3 324 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 RPEQ96AT9 228 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 RANBP3Q9H6Z4 567 aaPredicted RBP16.7■□□□□ 0.26
VSX1-204ENST00000409958 ZNF696Q9H7X3 374 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 TAF9BQ9HBM6 251 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 VCX3AQ9NNX9 186 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 RNF114Q9Y508 228 aa16.7■□□□□ 0.26
VSX1-204ENST00000409958 FBN3Q75N90 2809 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 NAPSAO96009 420 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 MNDAP41218 407 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 VEGFCP49767 419 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 TMEM50BP56557 158 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 PRR18Q8N4B5 295 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 OR4C13Q8NGP0 309 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 OR10X1Q8NGY0 326 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 OR1L1Q8NH94 360 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 WFDC12Q8WWY7 111 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 TOMM40LQ969M1 308 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 KCTD7Q96MP8 289 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 CHCHD6Q9BRQ6 235 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 NPFFR1Q9GZQ6 430 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 RIMS4Q9H426 269 aaPredicted RBP16.69■□□□□ 0.26
VSX1-204ENST00000409958 LIN7BQ9HAP6 207 aa16.69■□□□□ 0.26
VSX1-204ENST00000409958 IGHV3-43A0A0B4J1X8 118 aa16.68■□□□□ 0.26
VSX1-204ENST00000409958 NOTOA8MTQ0 251 aa16.68■□□□□ 0.26
VSX1-204ENST00000409958 IGHV3-43DP0DP04 118 aa16.68■□□□□ 0.26
VSX1-204ENST00000409958 GADD45AP24522 165 aa16.68■□□□□ 0.26
VSX1-204ENST00000409958 KIR2DS4P43632 304 aa16.68■□□□□ 0.26
VSX1-204ENST00000409958 PROK1P58294 105 aa16.68■□□□□ 0.26
VSX1-204ENST00000409958 PLA2G7Q13093 441 aa16.68■□□□□ 0.26
VSX1-204ENST00000409958 Q6ZTK2 550 aa16.68■□□□□ 0.26
VSX1-204ENST00000409958 TMEM219Q86XT9 240 aa16.68■□□□□ 0.26
VSX1-204ENST00000409958 DTX3Q8N9I9 347 aa16.68■□□□□ 0.26
VSX1-204ENST00000409958 OCSTAMPQ9BR26 566 aa16.68■□□□□ 0.26
VSX1-204ENST00000409958 GNG12Q9UBI6 72 aa16.68■□□□□ 0.26
VSX1-204ENST00000409958 TRBV6-6A0A0A6YYG2 114 aa16.67■□□□□ 0.26
VSX1-204ENST00000409958 A0A1W2PPE3 182 aa16.67■□□□□ 0.26
VSX1-204ENST00000409958 RAB6AP20340 208 aa16.67■□□□□ 0.26
VSX1-204ENST00000409958 RAB7AP51149 207 aa16.67■□□□□ 0.26
VSX1-204ENST00000409958 FAM53AQ6NSI3 398 aaPredicted RBP16.67■□□□□ 0.26
VSX1-204ENST00000409958 ZNF880Q6PDB4 577 aa16.67■□□□□ 0.26
VSX1-204ENST00000409958 MOB1BQ7L9L4 216 aa16.67■□□□□ 0.26
VSX1-204ENST00000409958 PTX4Q96A99 478 aa16.67■□□□□ 0.26
VSX1-204ENST00000409958 ARHGAP5-AS1Q96IT6 56 aa16.67■□□□□ 0.26
VSX1-204ENST00000409958 CHMP1AQ9HD42 196 aaPredicted RBP16.67■□□□□ 0.26
VSX1-204ENST00000409958 AK3Q9UIJ7 227 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms