RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 FAM53AQ6NSI3 398 aaPredicted RBP18.1■□□□□ 0.49
PTCD3-203ENST00000409783 ANKRD13BQ86YJ7 626 aa18.1■□□□□ 0.49
PTCD3-203ENST00000409783 OR52M1Q8NGK5 317 aa18.1■□□□□ 0.49
PTCD3-203ENST00000409783 OR10R2Q8NGX6 335 aa18.1■□□□□ 0.49
PTCD3-203ENST00000409783 LGALS14Q8TCE9 139 aa18.1■□□□□ 0.49
PTCD3-203ENST00000409783 MALSU1Q96EH3 234 aa18.1■□□□□ 0.49
PTCD3-203ENST00000409783 HDHD3Q9BSH5 251 aaPredicted RBP18.1■□□□□ 0.49
PTCD3-203ENST00000409783 CHIAQ9BZP6 476 aa18.1■□□□□ 0.49
PTCD3-203ENST00000409783 MINOS1-NBL1R4GNA1 71 aa18.1■□□□□ 0.49
PTCD3-203ENST00000409783 TRBV6-6A0A0A6YYG2 114 aa18.09■□□□□ 0.49
PTCD3-203ENST00000409783 CTF1Q16619 201 aa18.09■□□□□ 0.49
PTCD3-203ENST00000409783 HLA-DRB5Q30154 266 aa18.09■□□□□ 0.49
PTCD3-203ENST00000409783 TRAT1Q6PIZ9 186 aa18.09■□□□□ 0.49
PTCD3-203ENST00000409783 ZNF554Q86TJ5 538 aa18.09■□□□□ 0.49
PTCD3-203ENST00000409783 OR5H6Q8NGV6 325 aa18.09■□□□□ 0.49
PTCD3-203ENST00000409783 OR9G1Q8NH87 305 aa18.09■□□□□ 0.49
PTCD3-203ENST00000409783 OR1L1Q8NH94 360 aa18.09■□□□□ 0.49
PTCD3-203ENST00000409783 LEAP2Q969E1 77 aa18.09■□□□□ 0.49
PTCD3-203ENST00000409783 TAF9BQ9HBM6 251 aa18.09■□□□□ 0.49
PTCD3-203ENST00000409783 PSG11Q9UQ72 335 aa18.09■□□□□ 0.49
PTCD3-203ENST00000409783 LY6LH3BQJ8 138 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 GABARAPO95166 117 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 IGHV3-7P01780 117 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 HBZP02008 142 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 SCAND1P57086 179 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 VBP1P61758 197 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 FAM189A2Q15884 450 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 AANATQ16613 207 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 IDNKQ5T6J7 187 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 C16orf87Q6PH81 154 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 ZNF596Q8TC21 504 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 PIFOQ8TCI5 191 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 RAB3CQ96E17 227 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 DPAGT1Q9H3H5 408 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 TNFRSF19Q9NS68 423 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 GFOD1Q9NXC2 390 aa18.08■□□□□ 0.48
PTCD3-203ENST00000409783 METTL21EPA6NDL7 271 aa18.07■□□□□ 0.48
PTCD3-203ENST00000409783 J3QR06 171 aa18.07■□□□□ 0.48
PTCD3-203ENST00000409783 MFNGO00587 321 aa18.07■□□□□ 0.48
PTCD3-203ENST00000409783 TMEM127O75204 238 aa18.07■□□□□ 0.48
PTCD3-203ENST00000409783 HTR1DP28221 377 aa18.07■□□□□ 0.48
PTCD3-203ENST00000409783 HMGN3Q15651 99 aa18.07■□□□□ 0.48
PTCD3-203ENST00000409783 SSX2Q16385 188 aa18.07■□□□□ 0.48
PTCD3-203ENST00000409783 SLC25A38Q96DW6 304 aa18.07■□□□□ 0.48
PTCD3-203ENST00000409783 SSX3Q99909 188 aa18.07■□□□□ 0.48
PTCD3-203ENST00000409783 ATG5Q9H1Y0 275 aa18.07■□□□□ 0.48
PTCD3-203ENST00000409783 RIMS4Q9H426 269 aaPredicted RBP18.07■□□□□ 0.48
PTCD3-203ENST00000409783 DPM3Q9P2X0 92 aa18.07■□□□□ 0.48
PTCD3-203ENST00000409783 IGHV3-43A0A0B4J1X8 118 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 VGLL3A8MV65 326 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 BUB1B-PAK6H3BSN5 160 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 SDCBPO00560 298 aaPredicted RBP18.06■□□□□ 0.48
PTCD3-203ENST00000409783 TOR1AO14656 332 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 SPINT2O43291 252 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 IGHV3-43DP0DP04 118 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 HIST1H1DP16402 221 aaKnown RBP18.06■□□□□ 0.48
PTCD3-203ENST00000409783 PRRX1P54821 245 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 LRRC75BQ2VPJ9 315 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 GPR107Q5VW38 600 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 CROCCP3Q8IVE0 287 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 NDNFQ8TB73 568 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 MMP28Q9H239 520 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 ETV7Q9Y603 341 aa18.06■□□□□ 0.48
PTCD3-203ENST00000409783 H3BUX3 64 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 GNB3P16520 340 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 SERPINB10P48595 397 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 TMEM30BQ3MIR4 351 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 GPR141Q7Z602 305 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 C8orf31Q8N9H6 132 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 ZNF439Q8NDP4 499 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 OR5R1Q8NH85 324 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 SLC25A46Q96AG3 418 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 CMSS1Q9BQ75 279 aaKnown RBP18.05■□□□□ 0.48
PTCD3-203ENST00000409783 CHMP1AQ9HD42 196 aaPredicted RBP18.05■□□□□ 0.48
PTCD3-203ENST00000409783 RAB9BQ9NP90 201 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 C12orf4Q9NQ89 552 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTCD3-203ENST00000409783 RHBDL2Q9NX52 303 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 KCNIP1Q9NZI2 227 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 VPREB3Q9UKI3 123 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 HILPDAQ9Y5L2 63 aa18.05■□□□□ 0.48
PTCD3-203ENST00000409783 A0A1W2PPE3 182 aa18.04■□□□□ 0.48
PTCD3-203ENST00000409783 FAM181BA6NEQ2 426 aa18.04■□□□□ 0.48
PTCD3-203ENST00000409783 POM121CA8CG34 1229 aa18.04■□□□□ 0.48
PTCD3-203ENST00000409783 GNG10P50151 68 aa18.04■□□□□ 0.48
PTCD3-203ENST00000409783 Q3ZCU0 254 aa18.04■□□□□ 0.48
PTCD3-203ENST00000409783 MOB1BQ7L9L4 216 aa18.04■□□□□ 0.48
PTCD3-203ENST00000409783 PRR18Q8N4B5 295 aa18.04■□□□□ 0.48
PTCD3-203ENST00000409783 LINC00311Q8N616 119 aa18.04■□□□□ 0.48
PTCD3-203ENST00000409783 TAF15Q92804 592 aaKnown RBP eCLIP18.04■□□□□ 0.48
PTCD3-203ENST00000409783 Q9N2K0 584 aa18.04■□□□□ 0.48
PTCD3-203ENST00000409783 ABRACLQ9P1F3 81 aa18.04■□□□□ 0.48
PTCD3-203ENST00000409783 SPATA2Q9UM82 520 aa18.04■□□□□ 0.48
PTCD3-203ENST00000409783 TMEM89A2RUT3 159 aa18.03■□□□□ 0.48
PTCD3-203ENST00000409783 LEUTXA8MZ59 168 aa18.03■□□□□ 0.48
PTCD3-203ENST00000409783 GPR137BO60478 399 aa18.03■□□□□ 0.48
PTCD3-203ENST00000409783 DYNLT3P51808 116 aa18.03■□□□□ 0.48
PTCD3-203ENST00000409783 HTD2P86397 168 aa18.03■□□□□ 0.48
PTCD3-203ENST00000409783 PLA1AQ53H76 456 aa18.03■□□□□ 0.48
PTCD3-203ENST00000409783 TPTE2P1Q5T6R2 138 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms