RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 NUDT19A8MXV4 375 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 FAM90A23PA8MXZ1 464 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 AP4M1O00189 453 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 CA11O75493 328 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 MPIG6BO95866 241 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 REG1BP48304 166 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 ST3GAL4Q11206 333 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 DOC2BQ14184 412 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 LRRC36Q1X8D7 754 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 GLIPR1L1Q6UWM5 242 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 OR2W3Q7Z3T1 314 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 STPG2Q8N412 459 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 NKAIN3Q8N8D7 197 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 ZFP41Q8N8Y5 198 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 ZNF485Q8NCK3 441 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 RTN4IP1Q8WWV3 396 aaPredicted RBP11.66□□□□□ -0.54
CBX3-203ENST00000409747 EAF1Q96JC9 268 aaPredicted RBP11.66□□□□□ -0.54
CBX3-203ENST00000409747 NOL4LQ96MY1 436 aaPredicted RBP11.66□□□□□ -0.54
CBX3-203ENST00000409747 OR14A2Q96R54 314 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 MCRIP2Q9BUT9 160 aaKnown RBP11.66□□□□□ -0.54
CBX3-203ENST00000409747 ETAA1Q9NY74 926 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 MYL12BO14950 172 aa11.65□□□□□ -0.54
CBX3-203ENST00000409747 MAPK3P27361 379 aaPredicted RBP11.65□□□□□ -0.54
CBX3-203ENST00000409747 CD1BP29016 333 aa11.65□□□□□ -0.54
CBX3-203ENST00000409747 ADARB1P78563 741 aaKnown RBP11.65□□□□□ -0.54
CBX3-203ENST00000409747 RAB12Q6IQ22 244 aa11.65□□□□□ -0.54
CBX3-203ENST00000409747 MRPL41Q8IXM3 137 aaKnown RBP11.65□□□□□ -0.54
CBX3-203ENST00000409747 OR8H1Q8NGG4 311 aa11.65□□□□□ -0.54
CBX3-203ENST00000409747 GGHQ92820 318 aa11.65□□□□□ -0.54
CBX3-203ENST00000409747 GNG12Q9UBI6 72 aa11.65□□□□□ -0.54
CBX3-203ENST00000409747 IGHV3-72A0A0B4J1Y9 119 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 C12orf77C9JDV5 145 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 MOSP00540 346 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 CD1AP06126 327 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 GLAP06280 429 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 CAPGP40121 348 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 THBS3P49746 956 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 ZNF137PP52743 207 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 SYT6Q5T7P8 510 aaPredicted RBP11.64□□□□□ -0.55
CBX3-203ENST00000409747 TEX38Q6PEX7 206 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 ETV3LQ6ZN32 361 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 SLC25A48Q6ZT89 311 aaKnown RBP11.64□□□□□ -0.55
CBX3-203ENST00000409747 C8orf59Q8N0T1 100 aaPredicted RBP11.64□□□□□ -0.55
CBX3-203ENST00000409747 Q8N6K4 173 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 KLHL30-AS1Q8NEE0 82 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 UBALD1Q8TB05 177 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 ST6GALNAC6Q969X2 333 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 DERL3Q96Q80 235 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 ABCG5Q9H222 651 aa11.64□□□□□ -0.55
CBX3-203ENST00000409747 ZMAT5Q9UDW3 170 aaKnown RBP11.64□□□□□ -0.55
CBX3-203ENST00000409747 IGHV3-43A0A0B4J1X8 118 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 RRP9O43818 475 aaKnown RBP11.63□□□□□ -0.55
CBX3-203ENST00000409747 MAS1P04201 325 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 IGHV3-43DP0DP04 118 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 MGMTP16455 207 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 MYCNOSP40205 109 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 GPR12P47775 334 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 EGFEM1PQ0D2K5 195 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 STEAP3Q658P3 488 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 GAPTQ8N292 157 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 TMEM104Q8NE00 496 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 RASL11BQ9BPW5 248 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 UQCC2Q9BRT2 126 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 SELENOIQ9C0D9 397 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 GHRLQ9UBU3 117 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 PEX16Q9Y5Y5 336 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 PNMA8CA0A1B0GUJ8 204 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 A0A1W2PPK0 400 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 K7EIL1 84 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 CRTAPO75718 401 aaPredicted RBP11.63□□□□□ -0.55
CBX3-203ENST00000409747 SC5DO75845 299 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 WNT4P56705 351 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 C8orf86Q6ZUL3 223 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 ZNF554Q86TJ5 538 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 ZNF695Q8IW36 515 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 PRR18Q8N4B5 295 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 Q8N9W7 124 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 ZNF439Q8NDP4 499 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 OR4K15Q8NH41 348 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 LINC00527Q9UJ94 153 aa11.63□□□□□ -0.55
CBX3-203ENST00000409747 HBZP02008 142 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 CELP19835 753 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 FUT3P21217 361 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 GP2P55259 537 aaKnown RBP11.62□□□□□ -0.55
CBX3-203ENST00000409747 DCTN2Q13561 401 aaKnown RBP11.62□□□□□ -0.55
CBX3-203ENST00000409747 RCN1Q15293 331 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 PNLIPRP3Q17RR3 467 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 AHSA2Q719I0 299 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 Q96M66 194 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 S1PR3Q99500 378 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 CST11Q9H112 138 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 BANF2Q9H503 90 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 PLCXD1Q9NUJ7 323 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 KCNIP1Q9NZI2 227 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 PSORS1C1Q9UIG5 152 aa11.62□□□□□ -0.55
CBX3-203ENST00000409747 GPR50Q13585 617 aa11.61□□□□□ -0.55
CBX3-203ENST00000409747 CXorf66Q5JRM2 361 aaPredicted RBP11.61□□□□□ -0.55
CBX3-203ENST00000409747 UNQ9370/PRO34162Q6UXP9 181 aa11.61□□□□□ -0.55
CBX3-203ENST00000409747 OR10V1Q8NGI7 309 aa11.61□□□□□ -0.55
CBX3-203ENST00000409747 VCXQ9H320 206 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms