RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SPSB1Q96BD6 273 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 TLNRD1Q9H1K6 362 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 MFSD2BA6NFX1 497 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 SOCS1O15524 211 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 FAM157CP0CG43 387 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 RPS4Y1P22090 263 aaKnown RBP7.36□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF56Q15929 161 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 LYSMD2Q8IV50 215 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 OR52M1Q8NGK5 317 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 GPHA2Q96T91 129 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 BET1LQ9NYM9 111 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 PLXNA1Q9UIW2 1896 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 MDH2P40926 338 aaKnown RBP7.36□□□□□ -1.23
SCN9A-203ENST00000409672 HERVK_113P61574 105 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 MPV17LQ2QL34 196 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 ACSF3Q4G176 576 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF880Q6PDB4 577 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 CARFQ8N187 725 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 OR1L6Q8NGR2 347 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 SLC45A2Q9UMX9 530 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 ZAR1LA6NP61 321 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 TRDCB7Z8K6 153 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 CISD3P0C7P0 127 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 CXorf66Q5JRM2 361 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-203ENST00000409672 BVESQ8NE79 360 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 FDCSPQ8NFU4 85 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 PLEKHA2Q9HB19 425 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 EIF3GO75821 320 aaKnown RBP eCLIP7.36□□□□□ -1.23
SCN9A-203ENST00000409672 HPXP02790 462 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 JUNBP17275 347 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-203ENST00000409672 PRDX2P32119 198 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 MEOX2P50222 304 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 CLDN18P56856 261 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 VKORC1L1Q8N0U8 176 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 ATG101Q9BSB4 218 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 CD226Q15762 336 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 GAB4Q2WGN9 574 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 NTNG2Q96CW9 530 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 RASL12Q9NYN1 266 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 PITPNC1Q9UKF7 332 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 ANKRD36A6QL64 1941 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 DHRS7CA6NNS2 312 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 TAAR5O14804 337 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 LIMS3P0CW19 117 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 LIMS4P0CW20 117 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 CEBPEQ15744 281 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 GLMPQ8WWB7 406 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 J3QR06 171 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 GAPTQ8N292 157 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 PRO1933Q9H354 126 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 FCGR3AP08637 254 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 HIST1H1DP16402 221 aaKnown RBP7.35□□□□□ -1.23
SCN9A-203ENST00000409672 TMEM18Q96B42 140 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 DUSP15Q9H1R2 295 aaPredicted RBP7.35□□□□□ -1.23
SCN9A-203ENST00000409672 SLC6A13Q9NSD5 602 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 PHLDA3Q9Y5J5 127 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 PAGE4O60829 102 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 SFTA3P0C7M3 94 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 CDKN1AP38936 164 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 PCED1AQ9H1Q7 454 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 NKX2-6A6NCS4 301 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 PSG2P11465 335 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.35□□□□□ -1.236e-7■■■■■ 39.1
SCN9A-203ENST00000409672 CACNA1IQ9P0X4 2223 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 CDRT15L2A8MXV6 281 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 DXOO77932 396 aaKnown RBP7.35□□□□□ -1.23
SCN9A-203ENST00000409672 OR4A47Q6IF82 309 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 LIAT1Q6ZQX7 453 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF485Q8NCK3 441 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF385AQ96PM9 386 aaKnown RBP7.35□□□□□ -1.23
SCN9A-203ENST00000409672 GPA33Q99795 319 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 NACAE9PAV3 2078 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 A0A1B0GV72 72 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 NUDT3O95989 172 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 MEIG1Q5JSS6 88 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 SCNM1Q9BWG6 230 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 CCL28Q9NRJ3 127 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 BEX4Q9NWD9 120 aaPredicted RBP7.35□□□□□ -1.23
SCN9A-203ENST00000409672 FOXJ3Q9UPW0 622 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 PRR32B1ATL7 298 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 S100A8P05109 93 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 SLC6A1P30531 599 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 RIPPLY3P57055 190 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 MAP1LC3CQ9BXW4 147 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 PGPEP1Q9NXJ5 209 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 PIPOXQ9P0Z9 390 aa7.35□□□□□ -1.23
SCN9A-203ENST00000409672 TNRC6CQ9HCJ0 1690 aaKnown RBP7.35□□□□□ -1.23
SCN9A-203ENST00000409672 PRSS2P07478 247 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 KLRB1Q12918 225 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 SYNGR2O43760 224 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 DEDDO75618 318 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 UQCRFS1P47985 274 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 TMEM128Q5BJH2 165 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 TMEM78Q5T7P6 136 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 TMEM251Q8N6I4 163 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 GMPPAQ96IJ6 420 aaPredicted RBP7.34□□□□□ -1.23
SCN9A-203ENST00000409672 PPIAL4CA0A0B4J2A2 164 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 HSPB1P04792 205 aaKnown RBP7.34□□□□□ -1.23
SCN9A-203ENST00000409672 PPIAL4GP0DN37 164 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 ATP5G2Q06055 141 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms