RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 DLL4Q9NR61 685 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 PRR13Q9NZ81 148 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 PPIAL4AQ9Y536 164 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 CRYM-AS1A6NIL9 109 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 NKX6-3A6NJ46 265 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 SIX6O95475 246 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 DUS4LO95620 317 aaKnown RBP11.7□□□□□ -0.54
GPNMB-203ENST00000409458 HBZP02008 142 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 EDDM3BP56851 147 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 H2BFSP57053 126 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 ABCA11PQ4W5N1 156 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 DCAF12L2Q5VW00 463 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 MEX3BQ6ZN04 569 aaKnown RBP11.7□□□□□ -0.54
GPNMB-203ENST00000409458 DTX2Q86UW9 622 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 FGFRL1Q8N441 504 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 SECTM1Q8WVN6 248 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 WDR89Q96FK6 387 aaPredicted RBP11.7□□□□□ -0.54
GPNMB-203ENST00000409458 PHB2Q99623 299 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 CHIAQ9BZP6 476 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 DNTTIP1Q9H147 329 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 CLEC4MQ9H2X3 399 aaPredicted RBP11.7□□□□□ -0.54
GPNMB-203ENST00000409458 SLC2A9Q9NRM0 540 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 PIPOXQ9P0Z9 390 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 EPG5Q9HCE0 2579 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 KIAA2026Q5HYC2 2103 aa11.7□□□□□ -0.54
GPNMB-203ENST00000409458 A6NNC1 897 aa11.69□□□□□ -0.54
GPNMB-203ENST00000409458 LYNX1G3V0Z9 82 aa11.69□□□□□ -0.54
GPNMB-203ENST00000409458 SLC22A5O76082 557 aa11.69□□□□□ -0.54
GPNMB-203ENST00000409458 C1QBP02746 253 aa11.69□□□□□ -0.54
GPNMB-203ENST00000409458 LYNX1P0DP58 116 aa11.69□□□□□ -0.54
GPNMB-203ENST00000409458 ANKRD55Q3KP44 614 aa11.69□□□□□ -0.54
GPNMB-203ENST00000409458 LY6G6FQ5SQ64 297 aa11.69□□□□□ -0.54
GPNMB-203ENST00000409458 FAM53AQ6NSI3 398 aaPredicted RBP11.69□□□□□ -0.54
GPNMB-203ENST00000409458 LURAP1Q96LR2 239 aa11.69□□□□□ -0.54
GPNMB-203ENST00000409458 PARP12Q9H0J9 701 aaKnown RBP11.69□□□□□ -0.54
GPNMB-203ENST00000409458 FAM234AQ9H0X4 552 aa11.69□□□□□ -0.54
GPNMB-203ENST00000409458 OR2W1Q9Y3N9 320 aa11.69□□□□□ -0.54
GPNMB-203ENST00000409458 ABCA4P78363 2273 aa11.69□□□□□ -0.54
GPNMB-203ENST00000409458 C15orf65H3BRN8 121 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 CCSO14618 274 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 TMPRSS2O15393 492 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 GIPP09681 153 aaPredicted RBP11.68□□□□□ -0.54
GPNMB-203ENST00000409458 COL8A2P25067 703 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 GNRHRP30968 328 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 GNMTQ14749 295 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 HFEQ30201 348 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 C11orf88Q6PI97 169 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 ZNF818PQ6ZRF7 136 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 KCTD9Q7L273 389 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 NOXA1Q86UR1 476 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 OR52L2PQ8NGH6 319 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 OR5D13Q8NGL4 314 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 GALMQ96C23 342 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 ZNF486Q96H40 463 aaPredicted RBP11.68□□□□□ -0.54
GPNMB-203ENST00000409458 TRAF4Q9BUZ4 470 aaPredicted RBP11.68□□□□□ -0.54
GPNMB-203ENST00000409458 SLC5A7Q9GZV3 580 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 NAA60Q9H7X0 242 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 UBTD1Q9HAC8 227 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 RDH8Q9NYR8 311 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 DSCAML1Q8TD84 2053 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 TEX13DA0A0J9YY54 714 aaPredicted RBP11.68□□□□□ -0.54
GPNMB-203ENST00000409458 G3V3Q6 166 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 HSD17B6O14756 317 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 TNFRSF13BO14836 293 aaPredicted RBP11.68□□□□□ -0.54
GPNMB-203ENST00000409458 HSPA12AO43301 675 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 FCN3O75636 299 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 HEXAP06865 529 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 ERP29P30040 261 aaKnown RBP11.68□□□□□ -0.54
GPNMB-203ENST00000409458 IL2RGP31785 369 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 CR1LQ2VPA4 569 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 TRAT1Q6PIZ9 186 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 TCF23Q7RTU1 214 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 SGPP2Q8IWX5 399 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 ZNF565Q8N9K5 539 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 OR5M8Q8NGP6 311 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 RTN4IP1Q8WWV3 396 aaPredicted RBP11.68□□□□□ -0.54
GPNMB-203ENST00000409458 ARL11Q969Q4 196 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 C14orf79Q96F83 325 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 RAB1BQ9H0U4 201 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 CCL28Q9NRJ3 127 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 LRBAP50851 2863 aa11.68□□□□□ -0.54
GPNMB-203ENST00000409458 DBX1A6NMT0 343 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 GPR31O00270 319 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 LY6HO94772 140 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 OR2A4O95047 310 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 IFNA2P01563 188 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 CEACAM6P40199 344 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 LYPD2Q6UXB3 125 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 CCDC71LQ8N9Z2 235 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 OR10V1Q8NGI7 309 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 RFESDQ8TAC1 157 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 OR2A7Q96R45 310 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 TMEM246Q9BRR3 403 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 NCOR1P1Q9H4R4 102 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 CTSZQ9UBR2 303 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 FBXO9Q9UK97 447 aaPredicted RBP11.67□□□□□ -0.54
GPNMB-203ENST00000409458 LAMP3Q9UQV4 416 aa11.67□□□□□ -0.54
GPNMB-203ENST00000409458 IGHV3-43A0A0B4J1X8 118 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 A0A0B4J2A0 478 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 ADAM20O43506 726 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms