RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TRAT1Q6PIZ9 186 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 PSG11Q9UQ72 335 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 A0A1W2PPC4 97 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 KLRC4-KLRK1H3BQV0 150 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 GNG10P50151 68 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 UBE2L3P68036 154 aaKnown RBP15.42■□□□□ 0.06
SMPD4-202ENST00000409031 C1QL4Q86Z23 238 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 DTX4Q9Y2E6 619 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 PIKFYVEQ9Y2I7 2098 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 A6NCN8 305 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 RAB29O14966 203 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HIST1H2BKO60814 126 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HIST1H2BJP06899 126 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HIST1H2BOP23527 126 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HIST1H2BBP33778 126 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HIST1H2BDP58876 126 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HIST1H2BCP62807 126 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HIST2H2BEQ16778 126 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.41■□□□□ 0.06
SMPD4-202ENST00000409031 DHRS13Q6UX07 377 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 GPBAR1Q8TDU6 330 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HIST1H2BHQ93079 126 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 SMIM12Q96EX1 92 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HIST1H2BNQ99877 126 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HIST1H2BMQ99879 126 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 MPC1Q9Y5U8 109 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 CD5P06127 495 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 TMEM187Q14656 261 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 SPINK9Q5DT21 86 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HEPN1Q6WQI6 88 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 SMPD2O60906 423 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 NDUFS6O75380 124 aaKnown RBP15.41■□□□□ 0.06
SMPD4-202ENST00000409031 NEURL1O76050 574 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 HAND1O96004 215 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 MPLP40238 635 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 DCAF12Q5T6F0 453 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 D2HGDHQ8N465 521 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 BOD1Q96IK1 185 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 PARLQ9H300 379 aa15.41■□□□□ 0.06
SMPD4-202ENST00000409031 TMEM229AB2RXF0 380 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 VENTXO95231 258 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 FGF5P12034 268 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 PPP1R14DQ9NXH3 145 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 OR1L4Q8NGR5 311 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 RBKSQ9H477 322 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 IL19Q9UHD0 177 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 PEBP1P30086 187 aaKnown RBP15.4■□□□□ 0.06
SMPD4-202ENST00000409031 OR1K1Q8NGR3 316 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 OR2I1PQ8NGU4 316 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 HSD17B10Q99714 261 aaKnown RBP15.4■□□□□ 0.06
SMPD4-202ENST00000409031 SAP30LQ9HAJ7 183 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 TIMM9Q9Y5J7 89 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 KIR2DS2P43631 304 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 COL10A1Q03692 680 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 TNFRSF9Q07011 255 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 CYP2G1PQ6ZSU1 146 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 FAM117AQ9C073 453 aa15.4■□□□□ 0.06
SMPD4-202ENST00000409031 MEX3AA1L020 520 aaKnown RBP15.39■□□□□ 0.05
SMPD4-202ENST00000409031 LMX1BO60663 402 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 RAMP1O60894 148 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 HIST1H1EP10412 219 aaKnown RBP15.39■□□□□ 0.05
SMPD4-202ENST00000409031 GABRA6Q16445 453 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 CPEB3Q8NE35 698 aaKnown RBP15.39■□□□□ 0.05
SMPD4-202ENST00000409031 TMEM56Q96MV1 263 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 PSMG3Q9BT73 122 aaPredicted RBP15.39■□□□□ 0.05
SMPD4-202ENST00000409031 COL25A1Q9BXS0 654 aaPredicted RBP15.39■□□□□ 0.05
SMPD4-202ENST00000409031 OR6C3Q9NZP0 311 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 RBM11P57052 281 aaKnown RBP15.39■□□□□ 0.05
SMPD4-202ENST00000409031 MPDU1O75352 247 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 CSN3P07498 182 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 GPX4P36969 197 aaPredicted RBP15.39■□□□□ 0.05
SMPD4-202ENST00000409031 MFAP2P55001 183 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 UCP3P55916 312 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 CST9Q5W186 159 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 ZCCHC14Q8WYQ9 949 aaKnown RBP15.39■□□□□ 0.05
SMPD4-202ENST00000409031 LRRC3CA6NJW4 275 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 PLP1P60201 277 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 SSMEM1Q8WWF3 244 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 R3HDM4Q96D70 268 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 TM4SF19Q96DZ7 209 aa15.39■□□□□ 0.05
SMPD4-202ENST00000409031 LRRC30A6NM36 301 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 J3QRE1 110 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 STAG3L2P0CL84 134 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 IL9P15248 144 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 CXCL12P48061 93 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 OR1C1Q15619 314 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 RFESDQ8TAC1 157 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 H1FXQ92522 213 aaKnown RBP15.38■□□□□ 0.05
SMPD4-202ENST00000409031 OR4C12Q96R67 309 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 MIEN1Q9BRT3 115 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 G6PC2Q9NQR9 355 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 SCGB1C2P0DMR2 95 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 ZNF718Q3SXZ3 478 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 ARSJQ5FYB0 599 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-202ENST00000409031 SLC25A34Q6PIV7 304 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 PCOLCE2Q9UKZ9 415 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 IGHV5-51A0A0C4DH38 117 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 LMO7DNF2Z398 122 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 LINC01387J3KSC0 135 aa15.38■□□□□ 0.05
SMPD4-202ENST00000409031 CORTO00230 105 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms