RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 NOL3O60936 208 aaKnown RBP13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 VENTXO95231 258 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 CD3GP09693 182 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 IGHV3-43DP0DP04 118 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 ZNF182P17025 639 aaPredicted RBP13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 PAX6P26367 422 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 LDLRAD2Q5SZI1 272 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 ZNF880Q6PDB4 577 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 TRAT1Q6PIZ9 186 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 Q6YL49 198 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 IZUMO1Q8IYV9 350 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 PHF21AQ96BD5 680 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 ISOC1Q96CN7 298 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 KCTD12Q96CX2 325 aaKnown RBP13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 BCL7BQ9BQE9 202 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 C12orf4Q9NQ89 552 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 ZNRD1Q9P1U0 126 aa13.96□□□□□ -0.17
PTCHD3P3-201ENST00000403073 TRAV18A0A075B6X5 111 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 TRBV6-6A0A0A6YYG2 114 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 H3BMQ9 156 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 F2RL2O00254 374 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 TOR1AO14656 332 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 SCGNO76038 276 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 CD34P28906 385 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 LOXL3P58215 753 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 HILS1P60008 231 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 MRPS15P82914 257 aaKnown RBP13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 BAMBIQ13145 260 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ARFRP1Q13795 201 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 HMGN3Q15651 99 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ZNF260Q3ZCT1 412 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 UBE2NLQ5JXB2 153 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ZDHHC22Q8N966 263 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 DUX5Q96PT3 197 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ABCG5Q9H222 651 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 PRDM13Q9H4Q3 707 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 Q9N2K0 584 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ESM1Q9NQ30 184 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 PSG11Q9UQ72 335 aa13.95□□□□□ -0.18
PTCHD3P3-201ENST00000403073 A0A1W2PPE3 182 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 CCDC160A6NGH7 325 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 SERPINE3A8MV23 424 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 IGLV1-47P01700 117 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 MELTFP08582 738 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 GNG10P50151 68 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 PRRX1P54821 245 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ARL6IP1Q15041 203 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ZNF554Q86TJ5 538 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 DYNAPQ8N1N2 210 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 OR52L2PQ8NGH6 319 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 OR10V1Q8NGI7 309 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 OR52M1Q8NGK5 317 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 OR4P4Q8NGL7 312 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 OR9G1Q8NH87 305 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ACOT12Q8WYK0 555 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 S100A16Q96FQ6 103 aaKnown RBP13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 RAB9BQ9NP90 201 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 OR2S2Q9NQN1 319 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 DIABLOQ9NR28 239 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 TNFRSF19Q9NS68 423 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 GFOD1Q9NXC2 390 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ZNF230Q9UIE0 474 aaPredicted RBP13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ZFHX3Q15911 3703 aa13.94□□□□□ -0.18
PTCHD3P3-201ENST00000403073 A0A0A6YYJ9 748 aa13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 TMEM235A6NFC5 223 aa13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 J3QR06 171 aa13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 HOXA3O43365 443 aaPredicted RBP13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 EIF4EP06730 217 aaKnown RBP13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 GSTP1P09211 210 aaKnown RBP13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 FBP1P09467 338 aa13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 HACD4Q5VWC8 232 aa13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 MOB1BQ7L9L4 216 aa13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ZNF596Q8TC21 504 aa13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 DYNC2LI1Q8TCX1 351 aa13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 MAFIPQ8WZ33 124 aa13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 GALMQ96C23 342 aa13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 GNG12Q9UBI6 72 aa13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 TBL2Q9Y4P3 447 aaKnown RBP13.93□□□□□ -0.18
PTCHD3P3-201ENST00000403073 A0A0A6YYH2 397 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 DNAJC9-AS1A6NH13 148 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 A6NJ64 397 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 POM121CA8CG34 1229 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 HPGDSO60760 199 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 FCGR3AP08637 254 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 SCTP09683 121 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 HTR1DP28221 377 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 SOX6P35712 828 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 TALDO1P37837 337 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 GNMTQ14749 295 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 SLC9A3R2Q15599 337 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 SSX2Q16385 188 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 HLA-DRB5Q30154 266 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 MZT2AQ6P582 158 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 BEND2Q8NDZ0 799 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 NUDCD2Q8WVJ2 157 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 IL1F10Q8WWZ1 152 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 AP3S1Q92572 193 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 MALSU1Q96EH3 234 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 JMJD8Q96S16 334 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms