RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 ZNF638Q14966 1978 aaKnown RBP7.79□□□□□ -1.16
PTPRM-202ENST00000400053 PLXNA1Q9UIW2 1896 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 HBZP02008 142 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 CD3EP07766 207 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 BTF3P20290 206 aaKnown RBP7.79□□□□□ -1.16
PTPRM-202ENST00000400053 ASCL5Q7RTU5 278 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 LRRC29Q8WV35 223 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 ASB5Q8WWX0 329 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 PARP11Q9NR21 331 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 PITPNC1Q9UKF7 332 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 CEP250Q9BV73 2442 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 MYO16Q9Y6X6 1858 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 C2CD4DB7Z1M9 353 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 PLPP3O14495 311 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 TCF21O43680 179 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 ZNF32P17041 273 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 ORM2P19652 201 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 P2RY1P47900 373 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 CCDC144NLQ6NUI1 221 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 Q6ZS52 159 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 OR5AU1Q8NGC0 362 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 OR8B12Q8NGG6 310 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 C10orf35Q96D05 121 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 TNFSF14O43557 240 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 PDE6DO43924 150 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 VSIG8P0DPA2 414 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 MMP9P14780 707 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 CD82P27701 267 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 CD1BP29016 333 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 OR10J1P30954 320 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 GNG10P50151 68 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 SUCLG1P53597 346 aaKnown RBP7.79□□□□□ -1.16
PTPRM-202ENST00000400053 TWIST1Q15672 202 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 KHDC3LQ587J8 217 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 RFLNBQ8N5W9 214 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 OR8B3Q8NGG8 313 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 SP7Q8TDD2 431 aaPredicted RBP7.79□□□□□ -1.16
PTPRM-202ENST00000400053 DYNLRB2Q8TF09 96 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 SNRNP40Q96DI7 357 aaKnown RBP7.79□□□□□ -1.16
PTPRM-202ENST00000400053 STARD4Q96DR4 205 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 OR2V2Q96R30 315 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 OR8B2Q96RD0 313 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 ZNF552Q9H707 407 aaPredicted RBP7.79□□□□□ -1.16
PTPRM-202ENST00000400053 ZFP64Q9NPA5 681 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 ST6GALNAC2Q9UJ37 374 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 DNPH1O43598 174 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 SYNGR2O43760 224 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 CSN3P07498 182 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 ZNF345Q14585 488 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 ZXDCQ2QGD7 858 aaPredicted RBP7.79□□□□□ -1.16
PTPRM-202ENST00000400053 TMEM92Q6UXU6 159 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 TBC1D26Q86UD7 250 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 LDLRAD3Q86YD5 345 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 OR1N2Q8NGR9 330 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 RHOVQ96L33 236 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 SLC26A1Q9H2B4 701 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 GPR27Q9NS67 375 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 PCOLCE2Q9UKZ9 415 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 PIKFYVEQ9Y2I7 2098 aa7.79□□□□□ -1.16
PTPRM-202ENST00000400053 ERGP11308 486 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 VDAC1P21796 283 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 ATP6V0CP27449 155 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 PSG6Q00889 435 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 EWSR1Q01844 656 aaKnown RBP eCLIP7.78□□□□□ -1.16
PTPRM-202ENST00000400053 TNXAQ16473 311 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 OR1L6Q8NGR2 347 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 VN1R17PQ8TDU5 208 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 RAB37Q96AX2 223 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 TM4SF19Q96DZ7 209 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 MS4A3Q96HJ5 214 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 FAM60AQ9NP50 221 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 VAX2Q9UIW0 290 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 CENPVL1A0A0U1RR11 272 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 IFITM10A6NMD0 228 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 C11orf94C9JXX5 98 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 IGHV3-13P01766 116 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 IGHV3-7P01780 117 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 ZNF83P51522 516 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 TAS2R60P59551 318 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 SKP2Q13309 424 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 COL19A1Q14993 1142 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 D2HGDHQ8N465 521 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 FADS6Q8N9I5 356 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 TMEM204Q9BSN7 226 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 ALX4Q9H161 411 aaPredicted RBP7.78□□□□□ -1.16
PTPRM-202ENST00000400053 LPAR5Q9H1C0 372 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 MOB4Q9Y3A3 225 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 BRCA1P38398 1863 aaKnown RBP7.78□□□□□ -1.16
PTPRM-202ENST00000400053 NKX2-6A6NCS4 301 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 TRGC2P03986 189 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 COX7A1P24310 79 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 WIPI1Q5MNZ9 446 aaPredicted RBP7.78□□□□□ -1.16
PTPRM-202ENST00000400053 TDHQ8IZJ6 230 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 SLC25A40Q8TBP6 338 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 ZPLD1Q8TCW7 415 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 TMEM70Q9BUB7 260 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 OR2D2Q9H210 308 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 ZNF107Q9UII5 783 aaPredicted RBP7.78□□□□□ -1.16
PTPRM-202ENST00000400053 KLK10O43240 276 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 RPLP1P05386 114 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms