RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ZNF816Q0VGE8 651 aaPredicted RBP10.67□□□□□ -0.7
VCX3A-202ENST00000398729 GPR50Q13585 617 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 DIAPH2-AS1Q14236 149 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 SPHARQ15513 63 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 ACSM3Q53FZ2 586 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 C6orf183Q5T699 404 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 SYT6Q5T7P8 510 aaPredicted RBP10.67□□□□□ -0.7
VCX3A-202ENST00000398729 UNQ9370/PRO34162Q6UXP9 181 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 LINC00311Q8N616 119 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 C8orf31Q8N9H6 132 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 TMEM104Q8NE00 496 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 UBALD1Q8TB05 177 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 CST11Q9H112 138 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 GFOD1Q9NXC2 390 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 IGHV3-43A0A0B4J1X8 118 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 TCRBV4S1A1TA0A5B7 111 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 H0YHG0 523 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 CA11O75493 328 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 IGKV1D-33P01593 117 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 IGKV1-33P01594 117 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 GLAP06280 429 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 IGHV3-43DP0DP04 118 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 FUT3P21217 361 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 AQP4P55087 323 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 LOXL3P58215 753 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 INSL4Q14641 139 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 MED22Q15528 200 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 TMEM30BQ3MIR4 351 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 Q3ZCU0 254 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 GLT8D1Q68CQ7 371 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 TRAT1Q6PIZ9 186 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 MOB3BQ86TA1 216 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 OR4X2Q8NGF9 303 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 OR4K15Q8NH41 348 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 NRG4Q8WWG1 115 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 PHYHIPQ92561 330 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 FAM46BQ96A09 425 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 Q96M66 194 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 TMED9Q9BVK6 235 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 TPRKBQ9Y3C4 175 aa10.66□□□□□ -0.7
VCX3A-202ENST00000398729 IGHV1-3A0A0C4DH29 117 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 A0A1W2PRX2 142 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 C12orf77C9JDV5 145 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 FGF16O43320 207 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 SC5DO75845 299 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 UBBP0CG47 229 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 PF4V1P10720 104 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 VHLP40337 213 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 REG1BP48304 166 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 HNF4GQ14541 408 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 RBM48Q5RL73 367 aaKnown RBP10.65□□□□□ -0.7
VCX3A-202ENST00000398729 FAM27D1Q5T7N8 215 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 GAPTQ8N292 157 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 PRR18Q8N4B5 295 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 C5orf56Q8N8D9 126 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 GNG12Q9UBI6 72 aa10.65□□□□□ -0.7
VCX3A-202ENST00000398729 LSM2Q9Y333 95 aaKnown RBP10.65□□□□□ -0.7
VCX3A-202ENST00000398729 TSSC4Q9Y5U2 329 aaPredicted RBP10.65□□□□□ -0.7
VCX3A-202ENST00000398729 UBE2QL1A1L167 161 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 PDCD6O75340 191 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 MPIG6BO95866 241 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 HBZP02008 142 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 RCC1P18754 421 aaPredicted RBP10.64□□□□□ -0.71
VCX3A-202ENST00000398729 SRMP19623 302 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 SLC35A2P78381 396 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 EBI3Q14213 229 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 HSD17B12Q53GQ0 312 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 TCTEX1D4Q5JR98 221 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 KHDC1LQ5JSQ8 128 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 SIGIRRQ6IA17 410 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 FAM53AQ6NSI3 398 aaPredicted RBP10.64□□□□□ -0.71
VCX3A-202ENST00000398729 CEACAM19Q7Z692 300 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 LRRTM1Q86UE6 522 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 RTN4IP1Q8WWV3 396 aaPredicted RBP10.64□□□□□ -0.71
VCX3A-202ENST00000398729 SGCDQ92629 289 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 UFD1Q92890 307 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 KCNIP1Q9NZI2 227 aa10.64□□□□□ -0.71
VCX3A-202ENST00000398729 IGHV3-72A0A0B4J1Y9 119 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 PSMB11A5LHX3 300 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 TXNL1O43396 289 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 CD33P20138 364 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 MYF6P23409 242 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 GP2P55259 537 aaKnown RBP10.63□□□□□ -0.71
VCX3A-202ENST00000398729 IRF3Q14653 427 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 OXLD1Q5BKU9 147 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 NKAPLQ5M9Q1 402 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 C1orf100Q5SVJ3 147 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 LIPKQ5VXJ0 399 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 STEAP3Q658P3 488 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 SLC25A48Q6ZT89 311 aaKnown RBP10.63□□□□□ -0.71
VCX3A-202ENST00000398729 ZNF554Q86TJ5 538 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 IZUMO1Q8IYV9 350 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 OR10V1Q8NGI7 309 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 OR2T10Q8NGZ9 312 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 OR1L1Q8NH94 360 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 ST6GALNAC6Q969X2 333 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 EAF1Q96JC9 268 aaPredicted RBP10.63□□□□□ -0.71
VCX3A-202ENST00000398729 NEDD4LQ96PU5 975 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 ANKRD60Q9BZ19 345 aa10.63□□□□□ -0.71
VCX3A-202ENST00000398729 VCX3BQ9H321 246 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms