RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 OR1K1Q8NGR3 316 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 Q8WTZ3 238 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 ANXA10Q9UJ72 324 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 RHBDL1O75783 438 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 C1QCP02747 245 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 IL11P20809 199 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 MGAT2Q10469 447 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 GTF2H5Q6ZYL4 71 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 PPP1R32Q7Z5V6 425 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 TMEM116Q8NCL8 245 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 FAM222BQ8WU58 562 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 PRSS50Q9UI38 385 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 SEZ6L2Q6UXD5 910 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 OR4X1Q8NH49 305 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 SF3B6Q9Y3B4 125 aaKnown RBP12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 IGKV1-8A0A0C4DH67 115 aa12.4□□□□□ -0.43
PCDHA11-201ENST00000398640 CD1BP29016 333 aa12.4□□□□□ -0.43
PCDHA11-201ENST00000398640 WNT5AP41221 380 aa12.4□□□□□ -0.43
PCDHA11-201ENST00000398640 DTD1Q8TEA8 209 aa12.4□□□□□ -0.43
PCDHA11-201ENST00000398640 WNT2BQ93097 391 aa12.4□□□□□ -0.43
PCDHA11-201ENST00000398640 WDFY2Q96P53 400 aa12.4□□□□□ -0.43
PCDHA11-201ENST00000398640 AP5S1Q9NUS5 200 aa12.4□□□□□ -0.43
PCDHA11-201ENST00000398640 TMEM8BA6NDV4 472 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 OR2T8A6NH00 312 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 PTBP3O95758 552 aaKnown RBP12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 TPRX1Q8N7U7 411 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 DCTN5Q9BTE1 182 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 PRSS1P07477 247 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 TMEM33P57088 247 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 EFEMP2O95967 443 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 SNRPCP09234 159 aaKnown RBP12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 ERVFRD-1P60508 538 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 LY6DQ14210 128 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 MRGPRFQ96AM1 343 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 OR2V2Q96R30 315 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 TMSB15BA0A087X1C1 80 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 INHBBP09529 407 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 FAM214BQ7L5A3 538 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 TECRQ9NZ01 308 aaKnown RBP12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 FFAR1O14842 300 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 SYNGR2O43760 224 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 CCDC144NLQ6NUI1 221 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 DOLPP1Q86YN1 238 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 TEX29Q8N6K0 151 aa12.39□□□□□ -0.43
PCDHA11-201ENST00000398640 ID1P41134 155 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 CA10Q9NS85 328 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 CBY3A6NI87 242 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 UPK3AO75631 287 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 CES1P1Q9UKY3 287 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 ANKRD20A5PA0PJZ0 165 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 GZMHP20718 246 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 NPY1RP25929 384 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 RRN3P1Q2M238 152 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 C10orf113Q5VZT2 155 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 CLEC18BQ6UXF7 455 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 FAM24BQ8N5W8 94 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 TMEM140Q9NV12 185 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 C19orf35Q6ZS72 473 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 J3QR89 54 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 C1QAP02745 245 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 BGLAPP02818 100 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 ATP6V1FQ16864 119 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 PRSS54Q6PEW0 395 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 ADAD2Q8NCV1 583 aaKnown RBP12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 MS4A3Q96HJ5 214 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 ZNF714Q96N38 554 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 WIPI2Q9Y4P8 454 aa12.38□□□□□ -0.43
PCDHA11-201ENST00000398640 HLA-GP17693 338 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 PPP1CCP36873 323 aaKnown RBP12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 IL22RA2Q969J5 263 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 ABHD1Q96SE0 405 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 HDHD3Q9BSH5 251 aaPredicted RBP12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 IGKV3D-15A0A087WSY6 115 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 CDRT15L2A8MXV6 281 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 CYB5R3P00387 301 aaPredicted RBP12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 IGKV3-15P01624 115 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 CTSDP07339 412 aaPredicted RBP12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 SLC26A10Q8NG04 563 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 C12orf57Q99622 126 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 ZNF552Q9H707 407 aaPredicted RBP12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 J3QT63 122 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 CLDN14O95500 239 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 PMS2P11Q13670 270 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 NPAS1Q99742 590 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 SLC35B3Q9H1N7 401 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 RNF122Q9H9V4 155 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 FOXD3Q9UJU5 478 aaPredicted RBP12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 A0A0J9YW62 118 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 TMEM210A6NLX4 147 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 PPYP01298 95 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 PSG2P11465 335 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 PSMB2P49721 201 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 RAG2P55895 527 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 P2RY6Q15077 328 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 OR10D4PQ8NGN7 298 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 ITLN1Q8WWA0 313 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 SFXN3Q9BWM7 321 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 MRPL37Q9BZE1 423 aaKnown RBP12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 CHRNA10Q9GZZ6 450 aa12.37□□□□□ -0.43
PCDHA11-201ENST00000398640 RNF115Q9Y4L5 304 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms