RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 MAGEB3O15480 346 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 MOSP00540 346 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 PSMB8P28062 276 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 SOX6P35712 828 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 SNRPGP62308 76 aaKnown RBP6.83□□□□□ -1.32
CAPN3-208ENST00000397204 RUNX1Q01196 453 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 CFHR3Q02985 330 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 RSU1Q15404 277 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 DEFB136Q30KP8 78 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF429Q86V71 674 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 SUMF2Q8NBJ7 301 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 TMEM104Q8NE00 496 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 OR11H1Q8NG94 326 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 PLPPR1Q8TBJ4 325 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 RTN4IP1Q8WWV3 396 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-208ENST00000397204 ARL11Q969Q4 196 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 SLC7A6OSQ96CW6 309 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-208ENST00000397204 RNFT2Q96EX2 444 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 DPCDQ9BVM2 203 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-208ENST00000397204 FAM53CQ9NYF3 392 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 EXOGQ9Y2C4 368 aaKnown RBP6.83□□□□□ -1.32
CAPN3-208ENST00000397204 BIRC6Q9NR09 4857 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 TRAV39A0A0B4J263 110 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 C15orf65H3BRN8 121 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 TXNL1O43396 289 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 ORC5O43913 435 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 FCGR1AP12314 374 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 LYL1P12980 280 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 RAB3AP20336 220 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 VDAC1P21796 283 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 IL3RAP26951 378 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 SSTR5P35346 364 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 REG1BP48304 166 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 MRPL28Q13084 256 aaKnown RBP6.82□□□□□ -1.32
CAPN3-208ENST00000397204 GALEQ14376 348 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 NHLRC3Q5JS37 347 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 FAM27D1Q5T7N8 215 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 STEAP3Q658P3 488 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF529Q6P280 563 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 TMEM65Q6PI78 240 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 AMIGO2Q86SJ2 522 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 SATL1Q86VE3 508 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 SYS1Q8N2H4 156 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 FAM71E2Q8N5Q1 922 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 OR1N2Q8NGR9 330 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 OR5AK2Q8NH90 309 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 MYOZ3Q8TDC0 251 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 TNFAIP8L1Q8WVP5 186 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 CENPNQ96H22 339 aaPredicted RBP6.82□□□□□ -1.32
CAPN3-208ENST00000397204 C4orf36Q96KX1 117 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 UBE2E2Q96LR5 201 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 KCTD7Q96MP8 289 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 GPER1Q99527 375 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 JAM3Q9BX67 310 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 RAB9BQ9NP90 201 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 IMPAD1Q9NX62 359 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 DHDHQ9UQ10 334 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 ST3GAL6Q9Y274 331 aa6.82□□□□□ -1.32
CAPN3-208ENST00000397204 EPPK1P58107 5090 aaKnown RBP6.82□□□□□ -1.32
CAPN3-208ENST00000397204 TMEM30CPA0ZSE6 113 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 TMEM212A6NML5 194 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF736B4DX44 427 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-208ENST00000397204 I3L521 148 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 SDCBPO00560 298 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-208ENST00000397204 GABRPO00591 440 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 OR7C1O76099 320 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-208ENST00000397204 LY86O95711 162 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 MT-ND4P03905 459 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 OR8U8P0C7N1 319 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 PPIFP30405 207 aaKnown RBP6.81□□□□□ -1.32
CAPN3-208ENST00000397204 VHLP40337 213 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF137PP52743 207 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 F2RL1P55085 397 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF616Q08AN1 781 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 KIAA0141Q14154 515 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF124Q15973 351 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 ZSCAN26Q16670 478 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 PIGYQ3MUY2 71 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 LINC00596Q86U02 117 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 LHFPL3Q86UP9 236 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 SBSPONQ8IVN8 264 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF491Q8N8L2 437 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 RCHY1Q96PM5 261 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 METTL9Q9H1A3 318 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 PAK1IP1Q9NWT1 392 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-208ENST00000397204 GFOD1Q9NXC2 390 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 VSIG4Q9Y279 399 aa6.81□□□□□ -1.32
CAPN3-208ENST00000397204 FAM90A10PA6NDY2 464 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 SPINT2O43291 252 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 FADS2O95864 444 aaKnown RBP6.8□□□□□ -1.32
CAPN3-208ENST00000397204 CSTBP04080 98 aaKnown RBP6.8□□□□□ -1.32
CAPN3-208ENST00000397204 GBX2P52951 348 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-208ENST00000397204 RBM11P57052 281 aaKnown RBP6.8□□□□□ -1.32
CAPN3-208ENST00000397204 MPV17LQ2QL34 196 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 TMEM30BQ3MIR4 351 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 CT45A1Q5HYN5 189 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF497Q6ZNH5 498 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 SLC25A48Q6ZT89 311 aaKnown RBP6.8□□□□□ -1.32
CAPN3-208ENST00000397204 OR10K1Q8NGX5 313 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 OR52N1Q8NH53 320 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms