RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SUMF2Q8NBJ7 301 aa11.5□□□□□ -0.57
SEC13-206ENST00000397102 ZNF439Q8NDP4 499 aa11.5□□□□□ -0.57
SEC13-206ENST00000397102 UBALD1Q8TB05 177 aa11.5□□□□□ -0.57
SEC13-206ENST00000397102 FLYWCH2Q96CP2 140 aaKnown RBP11.5□□□□□ -0.57
SEC13-206ENST00000397102 MED4Q9NPJ6 270 aa11.5□□□□□ -0.57
SEC13-206ENST00000397102 STUB1Q9UNE7 303 aa11.5□□□□□ -0.57
SEC13-206ENST00000397102 TNCP24821 2201 aa11.5□□□□□ -0.57
SEC13-206ENST00000397102 MITFO75030 526 aaPredicted RBP11.49□□□□□ -0.57
SEC13-206ENST00000397102 HTR1AP08908 422 aa11.49□□□□□ -0.57
SEC13-206ENST00000397102 ARSBP15848 533 aa11.49□□□□□ -0.57
SEC13-206ENST00000397102 BLVRBP30043 206 aaPredicted RBP11.49□□□□□ -0.57
SEC13-206ENST00000397102 TMED1Q13445 227 aa11.49□□□□□ -0.57
SEC13-206ENST00000397102 KCTD20Q7Z5Y7 419 aa11.49□□□□□ -0.57
SEC13-206ENST00000397102 OR5D14Q8NGL3 314 aa11.49□□□□□ -0.57
SEC13-206ENST00000397102 CPNE2Q96FN4 548 aaPredicted RBP11.49□□□□□ -0.57
SEC13-206ENST00000397102 NSL1Q96IY1 281 aa11.49□□□□□ -0.57
SEC13-206ENST00000397102 ELOVL1Q9BW60 279 aa11.49□□□□□ -0.57
SEC13-206ENST00000397102 IFT22Q9H7X7 185 aa11.49□□□□□ -0.57
SEC13-206ENST00000397102 A0A1W2PN81 502 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 ARPC1BO15143 372 aaKnown RBP11.48□□□□□ -0.57
SEC13-206ENST00000397102 SOX15O60248 233 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 HSPB1P04792 205 aaKnown RBP11.48□□□□□ -0.57
SEC13-206ENST00000397102 CHRNA7P36544 502 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 ACTBP60709 375 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 RSU1Q15404 277 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 C19orf54Q5BKX5 351 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 ANKRD13BQ86YJ7 626 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 SERPINA12Q8IW75 414 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 OR10K1Q8NGX5 313 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 TNFAIP8L1Q8WVP5 186 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 ANKRD60Q9BZ19 345 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 CST11Q9H112 138 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 ZNF581Q9P0T4 197 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 ERGIC3Q9Y282 383 aa11.48□□□□□ -0.57
SEC13-206ENST00000397102 OR4C45A6NMZ5 311 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 GABRPO00591 440 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 NBR2O15453 112 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 LANCL1O43813 399 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 OR7C1O76099 320 aaPredicted RBP11.47□□□□□ -0.57
SEC13-206ENST00000397102 ZNF134P52741 427 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 CRIP2P52943 208 aaPredicted RBP11.47□□□□□ -0.57
SEC13-206ENST00000397102 ECSCRQ19T08 205 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 TMEM30BQ3MIR4 351 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 CT45A1Q5HYN5 189 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 LPCAT4Q643R3 524 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 LIN54Q6MZP7 749 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 PARP16Q8N5Y8 322 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 TCTEX1D1Q8N7M0 179 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 CT45A3Q8NHU0 189 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 CCDC107Q8WV48 283 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 GPER1Q99527 375 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 ZNF251Q9BRH9 671 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 RSRP1Q9BUV0 290 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 FOXA2Q9Y261 457 aaPredicted RBP11.47□□□□□ -0.57
SEC13-206ENST00000397102 ST3GAL6Q9Y274 331 aa11.47□□□□□ -0.57
SEC13-206ENST00000397102 HERC2O95714 4834 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 C12orf77C9JDV5 145 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 SLC16A6O15403 523 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 HTR3BO95264 441 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 CSTBP04080 98 aaKnown RBP11.46□□□□□ -0.57
SEC13-206ENST00000397102 CALB2P22676 271 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 CNTFRP26992 372 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 ALKBH1Q13686 389 aaKnown RBP11.46□□□□□ -0.57
SEC13-206ENST00000397102 C5orf64Q2M2E5 130 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 NHLRC3Q5JS37 347 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 ASCL4Q6XD76 172 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 SPATA24Q86W54 205 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 CASTOR1Q8WTX7 329 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 RFKQ969G6 155 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 FAM192AQ9GZU8 254 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 RAB9BQ9NP90 201 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 KIAA1456Q9P272 454 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 GNG12Q9UBI6 72 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 ENOPH1Q9UHY7 261 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 FBXO7Q9Y3I1 522 aa11.46□□□□□ -0.57
SEC13-206ENST00000397102 RBMY1BA6NDE4 496 aaKnown RBP11.45□□□□□ -0.58
SEC13-206ENST00000397102 RBMY1EA6NEQ0 496 aaKnown RBP11.45□□□□□ -0.58
SEC13-206ENST00000397102 AIPO00170 330 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 MAGEB3O15480 346 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 SPINT2O43291 252 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 NDUFA3O95167 84 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 IGHV3-11P01762 117 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 RBMY1DP0C7P1 496 aaKnown RBP11.45□□□□□ -0.58
SEC13-206ENST00000397102 RBM11P57052 281 aaKnown RBP11.45□□□□□ -0.58
SEC13-206ENST00000397102 NDPQ00604 133 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 STEAP3Q658P3 488 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 KDM4DQ6B0I6 523 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 PYHIN1Q6K0P9 492 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 ZNF497Q6ZNH5 498 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 LINC00596Q86U02 117 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 SATL1Q86VE3 508 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 NPBQ8NG41 125 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 OR10V1Q8NGI7 309 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 OR8J1Q8NGP2 316 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 PELI1Q96FA3 418 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 RITA1Q96K30 269 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 THTPAQ9BU02 230 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 TUBA4BQ9H853 241 aa11.45□□□□□ -0.58
SEC13-206ENST00000397102 TCRBV3S1A0A5B6 114 aa11.44□□□□□ -0.58
SEC13-206ENST00000397102 DAPL1A0PJW8 107 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms