RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 SLC36A1Q7Z2H8 476 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 OR5AC2Q9NZP5 309 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 TRGV10A0A0A0MS01 117 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 IGHV1-18A0A0C4DH31 117 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 CD74P04233 296 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 PSG2P11465 335 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 LPAR6P43657 344 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 OR2F1Q13607 317 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 ZNF474Q6S9Z5 364 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-205ENST00000397017 DOLPP1Q86YN1 238 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 FBXO7Q9Y3I1 522 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 REG1BP48304 166 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 HLA-DRB3P79483 266 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 OR4A16Q8NH70 328 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 PRELID3BQ9Y3B1 194 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 WIPI2Q9Y4P8 454 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 SOX15O60248 233 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 SELLP14151 372 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 PPT1P50897 306 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 SRPXP78539 464 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 TMEM267Q0VDI3 215 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-205ENST00000397017 MSMO1Q15800 293 aa12.93□□□□□ -0.34
MCF2L-205ENST00000397017 RPL7L1Q6DKI1 246 aaKnown RBP12.93□□□□□ -0.34
MCF2L-205ENST00000397017 TMEM182Q6ZP80 229 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-205ENST00000397017 PQLC2LA1A4F0 135 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 PPIHO43447 177 aaKnown RBP12.92□□□□□ -0.34
MCF2L-205ENST00000397017 MELTFP08582 738 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 BSPH1Q075Z2 132 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 BAP18Q8IXM2 172 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 C1orf87Q8N0U7 546 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 SCARB1Q8WTV0 552 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 RAB18Q9NP72 206 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 BOD1L1Q8NFC6 3051 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 CST4P01036 141 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 OR10X1Q8NGY0 326 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 ZFP57Q9NU63 452 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 RNF7Q9UBF6 113 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 ZNF292O60281 2723 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 TPPPO94811 219 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 COX7A1P24310 79 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 HIST1H3AP68431 136 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 TIMM23BQ5SRD1 257 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 AVPI1Q5T686 147 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 HIST2H3PS2Q5TEC6 136 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 HIST2H3AQ71DI3 136 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 SFXN3Q9BWM7 321 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 OR2W1Q9Y3N9 320 aa12.92□□□□□ -0.34
MCF2L-205ENST00000397017 RNF212BA8MTL3 300 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 HBZP02008 142 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 ZNF735P0CB33 412 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 CD40P25942 277 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 UCNP55089 124 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 BOD1Q96IK1 185 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 SIGLEC5O15389 551 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 IGHG3P01860 377 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 LIAT1Q6ZQX7 453 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 CXorf58Q96LI9 332 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 SLC25A31Q9H0C2 315 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 GP6Q9HCN6 339 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 CISD1Q9NZ45 108 aaKnown RBP12.91□□□□□ -0.34
MCF2L-205ENST00000397017 LYNX1G3V0Z9 82 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 CLDN14O95500 239 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 METTL15P1P0C7V9 234 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 LYNX1P0DP58 116 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 QRFPP83859 136 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 NRN1LQ496H8 165 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 SLC25A32Q9H2D1 315 aa12.91□□□□□ -0.34
MCF2L-205ENST00000397017 HMGB3O15347 200 aaKnown RBP12.9□□□□□ -0.34
MCF2L-205ENST00000397017 EIF3GO75821 320 aaKnown RBP eCLIP12.9□□□□□ -0.34
MCF2L-205ENST00000397017 HES1Q14469 280 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 HFEQ30201 348 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 ZNF818PQ6ZRF7 136 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 WIPF3A6NGB9 483 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 RPL35P42766 123 aaKnown RBP12.9□□□□□ -0.34
MCF2L-205ENST00000397017 OR2G3Q8NGZ4 309 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 TM2D1Q9BX74 207 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 ALX4Q9H161 411 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-205ENST00000397017 LPAR2Q9HBW0 351 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 SDHAF2Q9NX18 166 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 FBXL17Q9UF56 701 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 HSF4Q9ULV5 492 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 TOR1AO14656 332 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 HOXA1P49639 335 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-205ENST00000397017 BTN1A1Q13410 526 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 LAMTOR1Q6IAA8 161 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 FOXL2NBQ6ZUU3 175 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 PLPPR1Q8TBJ4 325 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 C1orf147Q96MC9 270 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-205ENST00000397017 Q9N2K0 584 aa12.9□□□□□ -0.34
MCF2L-205ENST00000397017 LIN7CQ9NUP9 197 aaKnown RBP12.9□□□□□ -0.34
MCF2L-205ENST00000397017 COL4A2P08572 1712 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 NDUFB3O43676 98 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 GPR137BO60478 399 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 ATG12O94817 140 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 G6PCP35575 357 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 SNCAP37840 140 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 TMEM33P57088 247 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 CXorf66Q5JRM2 361 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-205ENST00000397017 ERGIC1Q969X5 290 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 S1PR3Q99500 378 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms