RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 FGF9P31371 208 aaPredicted RBP12.97□□□□□ -0.33
CLTA-203ENST00000396603 AESQ08117 197 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 MPV17LQ2QL34 196 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 C1orf100Q5SVJ3 147 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 RNF144BQ7Z419 303 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 OR51D1Q8NGF3 324 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 OR6M1Q8NGM8 313 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 OR9G1Q8NH87 305 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 LINC00574Q9H8X3 128 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 PLGRKTQ9HBL7 147 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 ZNF286AQ9HBT8 521 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 SPACA1Q9HBV2 294 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 ZMAT5Q9UDW3 170 aaKnown RBP12.97□□□□□ -0.33
CLTA-203ENST00000396603 MOB4Q9Y3A3 225 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 KMT2CQ8NEZ4 4911 aaKnown RBP12.96□□□□□ -0.33
CLTA-203ENST00000396603 KBTBD11-OT1A0A1B0GTJ5 212 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 K7EIL1 84 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 CALCBP10092 127 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 CD36P16671 472 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 HTR2CP28335 458 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 GLIPR1P48060 266 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 KCNJ3P48549 501 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 GP2P55259 537 aaKnown RBP12.96□□□□□ -0.33
CLTA-203ENST00000396603 RBM11P57052 281 aaKnown RBP12.96□□□□□ -0.33
CLTA-203ENST00000396603 SCN1BQ07699 218 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 KRBOX4Q5JUW0 171 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 Q6P435 159 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 SLC16A12Q6ZSM3 486 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 LINC00482Q8N8I6 264 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 ZNF565Q8N9K5 539 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 OR10K1Q8NGX5 313 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 DPF1Q92782 380 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 MCRIP2Q9BUT9 160 aaKnown RBP12.96□□□□□ -0.33
CLTA-203ENST00000396603 PPIL3Q9H2H8 161 aaKnown RBP12.96□□□□□ -0.33
CLTA-203ENST00000396603 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLTA-203ENST00000396603 ST3GAL6Q9Y274 331 aa12.96□□□□□ -0.33
CLTA-203ENST00000396603 FAM90A10PA6NDY2 464 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 FAM90A7PA6NKC0 464 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 TRIM64CA6NLI5 447 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 FAM90A23PA8MXZ1 464 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 SLC33A1O00400 549 aaPredicted RBP12.95□□□□□ -0.34
CLTA-203ENST00000396603 SLC17A2O00624 439 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 SLC22A1O15245 554 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 FGF16O43320 207 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 CRTAPO75718 401 aaPredicted RBP12.95□□□□□ -0.34
CLTA-203ENST00000396603 OR7C1O76099 320 aaPredicted RBP12.95□□□□□ -0.34
CLTA-203ENST00000396603 BPNT1O95861 308 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 RAB11BQ15907 218 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 C22orf42Q6IC83 251 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 TPRA1Q86W33 373 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 LYPD6Q86Y78 171 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 COMMD1Q8N668 190 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 OR10A7Q8NGE5 316 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 KCNG3Q8TAE7 436 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 CHPT1Q8WUD6 406 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 COQ2Q96H96 371 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 KCTD7Q96MP8 289 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 IFT22Q9H7X7 185 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 ZFP57Q9NU63 452 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 V9GY05 133 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 DNAH9Q9NYC9 4486 aa12.95□□□□□ -0.34
CLTA-203ENST00000396603 PSMB11A5LHX3 300 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 CGB3P0DN86 165 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 CGB7P0DN87 165 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 CD37P11049 281 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 MGMTP16455 207 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 RAB3BP20337 219 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 CD24P25063 80 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 RAB7AP51149 207 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 C17orf58Q2M2W7 97 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 PIGYQ3MUY2 71 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 PAN3Q58A45 887 aaKnown RBP12.94□□□□□ -0.34
CLTA-203ENST00000396603 BAIAP2L2Q6UXY1 529 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 RPEQ96AT9 228 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 KIRREL1Q96J84 757 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 BARHL1Q9BZE3 327 aa12.94□□□□□ -0.34
CLTA-203ENST00000396603 TXNL4BQ9NX01 149 aaKnown RBP12.94□□□□□ -0.34
CLTA-203ENST00000396603 AK6Q9Y3D8 172 aaKnown RBP12.94□□□□□ -0.34
CLTA-203ENST00000396603 ARSBP15848 533 aa12.93□□□□□ -0.34
CLTA-203ENST00000396603 GDNFP39905 211 aa12.93□□□□□ -0.34
CLTA-203ENST00000396603 RBM39Q14498 530 aaKnown RBP12.93□□□□□ -0.34
CLTA-203ENST00000396603 OR2W3Q7Z3T1 314 aa12.93□□□□□ -0.34
CLTA-203ENST00000396603 OR8H3Q8N146 312 aa12.93□□□□□ -0.34
CLTA-203ENST00000396603 TOMM40LQ969M1 308 aa12.93□□□□□ -0.34
CLTA-203ENST00000396603 TMEM59Q9BXS4 323 aa12.93□□□□□ -0.34
CLTA-203ENST00000396603 MRPS26Q9BYN8 205 aaKnown RBP12.93□□□□□ -0.34
CLTA-203ENST00000396603 LOC100506127A0A0U1RQW1 187 aa12.92□□□□□ -0.34
CLTA-203ENST00000396603 NPIPB11E5RHQ5 1161 aa12.92□□□□□ -0.34
CLTA-203ENST00000396603 J3QR06 171 aa12.92□□□□□ -0.34
CLTA-203ENST00000396603 IL1AP01583 271 aa12.92□□□□□ -0.34
CLTA-203ENST00000396603 GLAP06280 429 aa12.92□□□□□ -0.34
CLTA-203ENST00000396603 MADCAM1Q13477 382 aa12.92□□□□□ -0.34
CLTA-203ENST00000396603 KHDC1LQ5JSQ8 128 aa12.92□□□□□ -0.34
CLTA-203ENST00000396603 MRPL41Q8IXM3 137 aaKnown RBP12.92□□□□□ -0.34
CLTA-203ENST00000396603 CHCHD6Q9BRQ6 235 aa12.92□□□□□ -0.34
CLTA-203ENST00000396603 URM1Q9BTM9 101 aaKnown RBP12.92□□□□□ -0.34
CLTA-203ENST00000396603 SELENOIQ9C0D9 397 aa12.92□□□□□ -0.34
CLTA-203ENST00000396603 OR51E2Q9H255 320 aa12.92□□□□□ -0.34
CLTA-203ENST00000396603 CALYQ9NYX4 217 aa12.92□□□□□ -0.34
CLTA-203ENST00000396603 STEAP1Q9UHE8 339 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms