RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 TNRC18O15417 2968 aaPredicted RBP13.37□□□□□ -0.27
HOXA3-202ENST00000396352 TRAV20A0A0B4J274 112 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 CXorf65A6NEN9 183 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 HS3ST1O14792 307 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 DFFBO76075 338 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 IGLV2-14P01704 120 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 SERPINA7P05543 415 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 DUSP3P51452 185 aaPredicted RBP13.37□□□□□ -0.27
HOXA3-202ENST00000396352 CLDN18P56856 261 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 FAM209BQ5JX69 171 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 OR10G4Q8NGN3 311 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 CT55Q8WUE5 264 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 POM121L2Q96KW2 1035 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 CABLES2Q9BTV7 478 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 GGACTQ9BVM4 153 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 SIRT7Q9NRC8 400 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 URGCP-MRPS24S4R325 110 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 TGIF2-C20orf24A0A0A6YYL0 155 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 IGKV1-39P01597 117 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 IGKV1D-39P04432 117 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 GLIPR1P48060 266 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 HLA-DRB3P79483 266 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 TIPARPQ7Z3E1 657 aaKnown RBP13.37□□□□□ -0.27
HOXA3-202ENST00000396352 OR10J5Q8NHC4 309 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 RDH5Q92781 318 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 PLK3Q9H4B4 646 aa13.37□□□□□ -0.27
HOXA3-202ENST00000396352 ZNF703Q9H7S9 590 aaPredicted RBP13.37□□□□□ -0.27
HOXA3-202ENST00000396352 CD300LBA8K4G0 201 aa13.36□□□□□ -0.27
HOXA3-202ENST00000396352 WNT2P09544 360 aa13.36□□□□□ -0.27
HOXA3-202ENST00000396352 LURAP1LQ8IV03 231 aa13.36□□□□□ -0.27
HOXA3-202ENST00000396352 C17orf78Q8N4C9 275 aa13.36□□□□□ -0.27
HOXA3-202ENST00000396352 TOLLIPQ9H0E2 274 aa13.36□□□□□ -0.27
HOXA3-202ENST00000396352 ERRFI1Q9UJM3 462 aaPredicted RBP13.36□□□□□ -0.27
HOXA3-202ENST00000396352 BOKQ9UMX3 212 aaPredicted RBP13.36□□□□□ -0.27
HOXA3-202ENST00000396352 CELSR3Q9NYQ7 3312 aa13.36□□□□□ -0.27
HOXA3-202ENST00000396352 CDX1P47902 265 aaPredicted RBP13.36□□□□□ -0.27
HOXA3-202ENST00000396352 PEAR1Q5VY43 1037 aaPredicted RBP13.36□□□□□ -0.27
HOXA3-202ENST00000396352 RAB40CQ96S21 281 aa13.36□□□□□ -0.27
HOXA3-202ENST00000396352 RSG1Q9BU20 258 aa13.36□□□□□ -0.27
HOXA3-202ENST00000396352 DOK5Q9P104 306 aa13.36□□□□□ -0.27
HOXA3-202ENST00000396352 OR1A1Q9P1Q5 309 aa13.36□□□□□ -0.27
HOXA3-202ENST00000396352 LRFN1Q9P244 771 aa13.36□□□□□ -0.27
HOXA3-202ENST00000396352 ARGFXA6NJG6 315 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 B4E171 279 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 TDGF1P13385 188 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 TSPAN7P41732 249 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 RAB2AP61019 212 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 SSPNQ14714 243 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 ZNF674Q2M3X9 581 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 FAM90A2PQ658T7 463 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 SERPINE2P07093 398 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 ZNF726P1Q15940 193 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 ZNF610Q8N9Z0 462 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 VSIRQ9H7M9 311 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 RPRMQ9NS64 109 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 DLL3Q9NYJ7 618 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 GNG13Q9P2W3 67 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 ARHGAP21Q5T5U3 1957 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 NEURL1O76050 574 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 ARL16Q0P5N6 197 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 DCAF12Q5T6F0 453 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 SSX7Q7RTT5 188 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 OR2M7Q8NG81 312 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 HIST1H2AAQ96QV6 131 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 TINAGQ9UJW2 476 aa13.35□□□□□ -0.27
HOXA3-202ENST00000396352 HIST1H2BKO60814 126 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 IFNA5P01569 189 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 HIST1H2BJP06899 126 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 HIST1H2BOP23527 126 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 S100GP29377 79 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 HIST1H2BBP33778 126 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 NDUFA6P56556 154 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 HIST1H2BDP58876 126 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 HIST1H2BCP62807 126 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 HIST2H2BEQ16778 126 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.34□□□□□ -0.27
HOXA3-202ENST00000396352 FAM58AQ8N1B3 248 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 HIST1H2BHQ93079 126 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 HIST1H2BNQ99877 126 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 HIST1H2BMQ99879 126 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 CACNG5Q9UF02 275 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 NPIPB11E5RHQ5 1161 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 CNOT4O95628 575 aaKnown RBP13.34□□□□□ -0.27
HOXA3-202ENST00000396352 WNT5AP41221 380 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 HAPLN4Q86UW8 402 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 OR10V1Q8NGI7 309 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 HES7Q9BYE0 225 aa13.34□□□□□ -0.27
HOXA3-202ENST00000396352 CISD1Q9NZ45 108 aaKnown RBP13.34□□□□□ -0.27
HOXA3-202ENST00000396352 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.33□□□□□ -0.27
HOXA3-202ENST00000396352 RHBDL1O75783 438 aa13.33□□□□□ -0.27
HOXA3-202ENST00000396352 IGKV1-5P01602 117 aa13.33□□□□□ -0.27
HOXA3-202ENST00000396352 TESK1Q15569 626 aa13.33□□□□□ -0.27
HOXA3-202ENST00000396352 PYY3Q5JQD4 70 aa13.33□□□□□ -0.27
HOXA3-202ENST00000396352 SPNS3Q6ZMD2 512 aa13.33□□□□□ -0.27
HOXA3-202ENST00000396352 ZNF525Q8N782 197 aa13.33□□□□□ -0.27
HOXA3-202ENST00000396352 LSM10Q969L4 123 aaKnown RBP13.33□□□□□ -0.27
HOXA3-202ENST00000396352 FAM173AQ9BQD7 235 aa13.33□□□□□ -0.27
HOXA3-202ENST00000396352 ZNF665Q9H7R5 613 aa13.33□□□□□ -0.27
HOXA3-202ENST00000396352 FRYQ5TBA9 3013 aa13.33□□□□□ -0.28
HOXA3-202ENST00000396352 DEGS1O15121 323 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms