RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 RTP5Q14D33 572 aa13.34□□□□□ -0.27
PTBP1-204ENST00000394601 OR2V1Q8NHB1 315 aa13.34□□□□□ -0.27
PTBP1-204ENST00000394601 CT55Q8WUE5 264 aa13.34□□□□□ -0.27
PTBP1-204ENST00000394601 RPUSD4Q96CM3 377 aaKnown RBP13.34□□□□□ -0.27
PTBP1-204ENST00000394601 HIST1H2AAQ96QV6 131 aa13.34□□□□□ -0.27
PTBP1-204ENST00000394601 FOXB1Q99853 325 aa13.34□□□□□ -0.27
PTBP1-204ENST00000394601 TMEM208Q9BTX3 173 aa13.34□□□□□ -0.27
PTBP1-204ENST00000394601 METTL9Q9H1A3 318 aa13.34□□□□□ -0.27
PTBP1-204ENST00000394601 IL36GQ9NZH8 169 aa13.34□□□□□ -0.27
PTBP1-204ENST00000394601 FAM230AA0A1W2PPH8 454 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 M0R143 59 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 SPINK2P20155 84 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 UCP3P55916 312 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 COL10A1Q03692 680 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 ARL6IP1Q15041 203 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 CEACAM16Q2WEN9 425 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 COLCA1Q6ZS62 124 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 CRIM1Q9NZV1 1036 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 P04436 131 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 DTYMKP23919 212 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 CLN3Q13286 438 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 FUT9Q9Y231 359 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 CFAP47Q6ZTR5 3102 aa13.33□□□□□ -0.28
PTBP1-204ENST00000394601 TNRC6AQ8NDV7 1962 aaKnown RBP13.33□□□□□ -0.28
PTBP1-204ENST00000394601 TEX38Q6PEX7 206 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 SLC22A25Q6T423 547 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 AAED1Q7RTV5 226 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 CMTM1Q8IZ96 169 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 SDSLQ96GA7 329 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 C1QTNF5Q9BXJ0 243 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 COLQQ9Y215 455 aaPredicted RBP13.32□□□□□ -0.28
PTBP1-204ENST00000394601 POMT1Q9Y6A1 747 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 TRAV34A0A0B4J273 112 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 CEBPZOSA8MTT3 80 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 DFFBO76075 338 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 IGHEP01854 428 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 OTX2P32243 289 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 LHFPL2Q6ZUX7 228 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 CALHM1Q8IU99 346 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 OR5C1Q8NGR4 320 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 RTN4IP1Q8WWV3 396 aaPredicted RBP13.32□□□□□ -0.28
PTBP1-204ENST00000394601 PAM16Q9Y3D7 125 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 TECTAO75443 2155 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 HSD17B6O14756 317 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 NRASP01111 189 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 LCATP04180 440 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 Q8NFD4 153 aa13.32□□□□□ -0.28
PTBP1-204ENST00000394601 RYDENQ9NUL5 291 aaKnown RBP13.32□□□□□ -0.28
PTBP1-204ENST00000394601 ZNF503-AS2A6NEH8 195 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 E5RGE8 158 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 ECI1P42126 302 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 HLA-DRB3P79483 266 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 TMEM187Q14656 261 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 SSPNQ14714 243 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 OR4X1Q8NH49 305 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 OR10J5Q8NHC4 309 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 TMEM45BQ96B21 275 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 MALSU1Q96EH3 234 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 ZNF665Q9H7R5 613 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 NSG2Q9Y328 171 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 IGKV3D-15A0A087WSY6 115 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 AQP7O14520 342 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 NEURL1O76050 574 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 HERPUD1Q15011 391 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 CNN3Q15417 329 aaKnown RBP13.31□□□□□ -0.28
PTBP1-204ENST00000394601 SPINK14Q6IE38 97 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 ERASQ7Z444 233 aa13.31□□□□□ -0.28
PTBP1-204ENST00000394601 TCN2P20062 427 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 PMELP40967 661 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 P2RY1P47900 373 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 ZXDAP98168 799 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 ARSJQ5FYB0 599 aaPredicted RBP13.3□□□□□ -0.28
PTBP1-204ENST00000394601 C1orf210Q8IVY1 113 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 ZNF391Q9UJN7 358 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 MARCH11A6NNE9 402 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
PTBP1-204ENST00000394601 SERPINA7P05543 415 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 CELA3AP09093 270 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 SRP19P09132 144 aaKnown RBP13.3□□□□□ -0.28
PTBP1-204ENST00000394601 ELLP55199 621 aaPredicted RBP13.3□□□□□ -0.28
PTBP1-204ENST00000394601 RELQ04864 619 aaPredicted RBP13.3□□□□□ -0.28
PTBP1-204ENST00000394601 DCAF12Q5T6F0 453 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 LGI3Q8N145 548 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 LRTM2Q8N967 370 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 SCRT1Q9BWW7 348 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 LOXL2Q9Y4K0 774 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 ST8SIA3O43173 380 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 SEC11BP0C7V7 166 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 LHX2P50458 406 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 FBXL14Q8N1E6 418 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 C18orf12Q96KH6 178 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 DIRC2Q96SL1 478 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 PRDM14Q9GZV8 571 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 P4HTMQ9NXG6 502 aa13.3□□□□□ -0.28
PTBP1-204ENST00000394601 ZDBF2Q9HCK1 2354 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 CLDN34H7C241 214 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 LAMTOR5O43504 91 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 SS18L1O75177 396 aaPredicted RBP13.29□□□□□ -0.28
PTBP1-204ENST00000394601 JOSD1Q15040 202 aaPredicted RBP13.29□□□□□ -0.28
PTBP1-204ENST00000394601 IZUMO4Q1ZYL8 232 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms