RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 PQLC1Q8N2U9 271 aa6.61□□□□□ -1.35
TRAV17-201ENST00000390445 ZFP41Q8N8Y5 198 aa6.61□□□□□ -1.35
TRAV17-201ENST00000390445 SUMF2Q8NBJ7 301 aa6.61□□□□□ -1.35
TRAV17-201ENST00000390445 OR4X2Q8NGF9 303 aa6.61□□□□□ -1.35
TRAV17-201ENST00000390445 TMEM106AQ96A25 262 aa6.61□□□□□ -1.35
TRAV17-201ENST00000390445 RPEQ96AT9 228 aa6.61□□□□□ -1.35
TRAV17-201ENST00000390445 AKR1E2Q96JD6 320 aa6.61□□□□□ -1.35
TRAV17-201ENST00000390445 Q96MT0 163 aa6.61□□□□□ -1.35
TRAV17-201ENST00000390445 NOL4LQ96MY1 436 aaPredicted RBP6.61□□□□□ -1.35
TRAV17-201ENST00000390445 FGF20Q9NP95 211 aaPredicted RBP6.61□□□□□ -1.35
TRAV17-201ENST00000390445 INPP5EQ9NRR6 644 aa6.61□□□□□ -1.35
TRAV17-201ENST00000390445 MRPS18AQ9NVS2 196 aaKnown RBP6.61□□□□□ -1.35
TRAV17-201ENST00000390445 ING4Q9UNL4 249 aa6.61□□□□□ -1.35
TRAV17-201ENST00000390445 MOB4Q9Y3A3 225 aa6.61□□□□□ -1.35
TRAV17-201ENST00000390445 RPL36Q9Y3U8 105 aaKnown RBP6.61□□□□□ -1.35
TRAV17-201ENST00000390445 TSSC4Q9Y5U2 329 aaPredicted RBP6.61□□□□□ -1.35
TRAV17-201ENST00000390445 HSPE1-MOB4S4R3N1 261 aa6.61□□□□□ -1.35
TRAV17-201ENST00000390445 IGHV3-43A0A0B4J1X8 118 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 IGHV3-72A0A0B4J1Y9 119 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 LINC01548A6NM66 108 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 NPIPB11E5RHQ5 1161 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 H3BUI4 141 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 K7EIL1 84 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 GEMIN2O14893 280 aaKnown RBP6.6□□□□□ -1.35
TRAV17-201ENST00000390445 MAGEB3O15480 346 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 MPZL2O60487 215 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 OR7C1O76099 320 aaPredicted RBP6.6□□□□□ -1.35
TRAV17-201ENST00000390445 IGKV1D-33P01593 117 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 IGKV1-33P01594 117 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 IGHV3-43DP0DP04 118 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 TMEM11P17152 192 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 C21orf33P30042 268 aaPredicted RBP6.6□□□□□ -1.35
TRAV17-201ENST00000390445 HOXD3P31249 432 aaPredicted RBP6.6□□□□□ -1.35
TRAV17-201ENST00000390445 MNDAP41218 407 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 REG1BP48304 166 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 KRTAP10-11P60412 298 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 HES1Q14469 280 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 KLHL22Q53GT1 634 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 DDI2Q5TDH0 399 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 ASCL4Q6XD76 172 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 Q6ZSN1 163 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 C5orf56Q8N8D9 126 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 ZNF565Q8N9K5 539 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 WFDC9Q8NEX5 89 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 Q8NFD4 153 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 CCDC107Q8WV48 283 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 CREB3L1Q96BA8 519 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 DPCDQ9BVM2 203 aaPredicted RBP6.6□□□□□ -1.35
TRAV17-201ENST00000390445 BARHL1Q9BZE3 327 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 CLEC2DQ9UHP7 191 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 ST3GAL6Q9Y274 331 aa6.6□□□□□ -1.35
TRAV17-201ENST00000390445 AMMECR1Q9Y4X0 333 aaPredicted RBP6.6□□□□□ -1.35
TRAV17-201ENST00000390445 A0A1W2PPK0 400 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 WI2-2373I1.2A0A1W2PRP0 233 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 PSMB11A5LHX3 300 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 OOSP1A8MZH6 123 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 C15orf65H3BRN8 121 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 BAG2O95816 211 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 FAM106CPP0CH98 169 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 ZNF93P35789 620 aaPredicted RBP6.59□□□□□ -1.35
TRAV17-201ENST00000390445 RBM11P57052 281 aaKnown RBP6.59□□□□□ -1.35
TRAV17-201ENST00000390445 SLC35A2P78381 396 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 MRPL28Q13084 256 aaKnown RBP6.59□□□□□ -1.35
TRAV17-201ENST00000390445 MADCAM1Q13477 382 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 ATAD3CQ5T2N8 411 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 CCDC144NLQ6NUI1 221 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 RPL22L1Q6P5R6 122 aaKnown RBP6.59□□□□□ -1.35
TRAV17-201ENST00000390445 OSR2Q8N2R0 312 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 OR10X1Q8NGY0 326 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 OR52N1Q8NH53 320 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 GPR148Q8TDV2 347 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 RAB24Q969Q5 203 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 DUX3Q96PT4 197 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 MYCBPQ99417 103 aaPredicted RBP6.59□□□□□ -1.35
TRAV17-201ENST00000390445 ZNF184Q99676 751 aaPredicted RBP6.59□□□□□ -1.35
TRAV17-201ENST00000390445 METTL9Q9H1A3 318 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 LINC00574Q9H8X3 128 aa6.59□□□□□ -1.35
TRAV17-201ENST00000390445 SMPD3Q9NY59 655 aaPredicted RBP6.59□□□□□ -1.35
TRAV17-201ENST00000390445 TRAV8-7A0A075B6U6 113 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 IGHV1-3A0A0C4DH29 117 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 TRBV5-5A0A0J9YX44 114 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 PNMA8CA0A1B0GUJ8 204 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 ZNF736B4DX44 427 aaPredicted RBP6.58□□□□□ -1.36
TRAV17-201ENST00000390445 SDCBPO00560 298 aaPredicted RBP6.58□□□□□ -1.36
TRAV17-201ENST00000390445 HSD17B6O14756 317 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 SLC31A2O15432 143 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 OGG1O15527 345 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 CSTBP04080 98 aaKnown RBP6.58□□□□□ -1.36
TRAV17-201ENST00000390445 CD2P06729 351 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 IGFBP3P17936 291 aaPredicted RBP6.58□□□□□ -1.36
TRAV17-201ENST00000390445 DCKP27707 260 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 BDKRB2P30411 391 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 VHLP40337 213 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 KCNJ3P48549 501 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 RPS11P62280 158 aaKnown RBP eCLIP6.58□□□□□ -1.36
TRAV17-201ENST00000390445 RPL23AP62750 156 aaKnown RBP6.58□□□□□ -1.36
TRAV17-201ENST00000390445 PPP3R1P63098 170 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 PAX5Q02548 391 aa6.58□□□□□ -1.36
TRAV17-201ENST00000390445 LRRC36Q1X8D7 754 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms