RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 TIMP4Q99727 224 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 VPS25Q9BRG1 176 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 TIMM9Q9Y5J7 89 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 DSPPQ9NZW4 1301 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 TCF20Q9UGU0 1960 aaKnown RBP4.34□□□□□ -1.71
LTN1-202ENST00000389194 MKRN2OSH3BPM6 223 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 H3BQ15 152 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 TBX6O95947 436 aaPredicted RBP4.34□□□□□ -1.71
LTN1-202ENST00000389194 HAND1O96004 215 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 LIFP15018 202 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 IL3RAP26951 378 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 TMEM50BP56557 158 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 PAX5Q02548 391 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 Q56UQ5 140 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 TGIF2LYQ8IUE0 185 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 LRRC75AQ8NAA5 344 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 KDF1Q8NAX2 398 aaPredicted RBP4.34□□□□□ -1.71
LTN1-202ENST00000389194 RHOVQ96L33 236 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 ZNF586Q9NXT0 402 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 WASHC3Q9Y3C0 194 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 PAM16Q9Y3D7 125 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 IGHV3-35A0A0C4DH35 117 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 C20orf202A1L168 122 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 DHRS7CA6NNS2 312 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 MEOX2P50222 304 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 SSBP1Q04837 148 aaKnown RBP4.34□□□□□ -1.71
LTN1-202ENST00000389194 PSG5Q15238 335 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 TNXAQ16473 311 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 DEGS2Q6QHC5 323 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 PIK3IP1Q96FE7 263 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 MS4A10Q96PG2 267 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 SLC17A5Q9NRA2 495 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 TMEM38BQ9NVV0 291 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 COLQQ9Y215 455 aaPredicted RBP4.34□□□□□ -1.71
LTN1-202ENST00000389194 LHFPL6Q9Y693 200 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 ZNF785A8K8V0 405 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 TRDCB7Z8K6 153 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 GLULP15104 373 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 FAM3BP58499 235 aaPredicted RBP4.34□□□□□ -1.71
LTN1-202ENST00000389194 R3HDM4Q96D70 268 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 KLHDC3Q9BQ90 382 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 PSME4Q14997 1843 aa4.34□□□□□ -1.71
LTN1-202ENST00000389194 PLXND1Q9Y4D7 1925 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 PMS2P1A4D2B8 440 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 C11orf94C9JXX5 98 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 H0YL77 283 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 KLF4O43474 513 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 NDUFB3O43676 98 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 PTBP3O95758 552 aaKnown RBP4.34□□□□□ -1.72
LTN1-202ENST00000389194 ZNF383Q8NA42 475 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 SLC24A4Q8NFF2 622 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 FAM216AQ8WUB2 273 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 RTN4RQ9BZR6 473 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 ZNF665Q9H7R5 613 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 PCOLCE2Q9UKZ9 415 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 CLDN34H7C241 214 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 RGS13O14921 159 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 MBPP02686 304 aaPredicted RBP4.34□□□□□ -1.72
LTN1-202ENST00000389194 CELA3AP09093 270 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 GNG4P50150 75 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 RAG2P55895 527 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 TAS2R45P59539 299 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 UBE2V2Q15819 145 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 ETFRF1Q6IPR1 90 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 BOD1Q96IK1 185 aa4.34□□□□□ -1.72
LTN1-202ENST00000389194 THADAQ6YHU6 1953 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 CGB1A6NKQ9 187 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 OTX1P32242 354 aaPredicted RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 CSN1S1P47710 185 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 HLA-DRB3P79483 266 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 RTP5Q14D33 572 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 SLC23A3Q6PIS1 610 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 FBLIM1Q8WUP2 373 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 VAMP8Q9BV40 100 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 OPN3Q9H1Y3 402 aaPredicted RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 TNFSF18Q9UNG2 199 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 NEUROG3Q9Y4Z2 214 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 BTBD17A6NE02 478 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 NPIPB8E9PQR5 432 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 CTDSPLO15194 276 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 CTSDP07339 412 aaPredicted RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 FCGR3AP08637 254 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 RFPL3SP0C7P2 107 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 KLF3P57682 345 aaPredicted RBP4.33□□□□□ -1.72
LTN1-202ENST00000389194 B2MP61769 119 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 SLC25A30Q5SVS4 291 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 ATRAIDQ6UW56 229 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 UBALD2Q8IYN6 164 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 OR2M7Q8NG81 312 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 PRR7Q8TB68 274 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 TIMD4Q96H15 378 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 ELOVL1Q9BW60 279 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 SRXN1Q9BYN0 137 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 SLC26A1Q9H2B4 701 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 ZGRF1Q86YA3 2104 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 TRAV38-1A0A0B4J264 116 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 A0A1W2PQM1 296 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 AMTP48728 403 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 ZP1P60852 638 aa4.33□□□□□ -1.72
LTN1-202ENST00000389194 RNF212Q495C1 297 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms