RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 IGKV1D-33P01593 117 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 IGKV1-33P01594 117 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 CTSSP25774 331 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 SRP14P37108 136 aaKnown RBP12.85□□□□□ -0.35
CTNS-202ENST00000381870 CDKN1AP38936 164 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 KCNMB1Q16558 191 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 TMEM41BQ5BJD5 291 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 MYPOPQ86VE0 399 aaPredicted RBP12.85□□□□□ -0.35
CTNS-202ENST00000381870 ZNF525Q8N782 197 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 OR1N1Q8NGS0 311 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 MRGPRX4Q96LA9 322 aa12.85□□□□□ -0.35
CTNS-202ENST00000381870 REPIN1Q9BWE0 567 aaKnown RBP12.85□□□□□ -0.35
CTNS-202ENST00000381870 A0A0U1RQK1 487 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 A0A1W2PR80 420 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 ZNF320A2RRD8 509 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 GRIFINA4D1Z8 144 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 IAPPP10997 89 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 UCP1P25874 307 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 CHRNB4P30926 498 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 COL5A1-AS1Q5SY13 56 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 OSR2Q8N2R0 312 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 OR4F5Q8NH21 305 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 OR4F4Q96R69 305 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 ZNF442Q9H7R0 627 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 SLC39A9Q9NUM3 307 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 MYO9BQ13459 2157 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 COL6A3P12111 3177 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 IGHV5-51A0A0C4DH38 117 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 TRAPPC6AO75865 159 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 NTSR1P30989 418 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 GFERP55789 205 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 PRDX4Q13162 271 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 TCF23Q7RTU1 214 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 HAPLN4Q86UW8 402 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 RPP25LQ8N5L8 163 aaKnown RBP12.84□□□□□ -0.35
CTNS-202ENST00000381870 CMTM2Q8TAZ6 248 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 IMMP2LQ96T52 175 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 PSMG3Q9BT73 122 aaPredicted RBP12.84□□□□□ -0.35
CTNS-202ENST00000381870 CCL28Q9NRJ3 127 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 AURKAIP1Q9NWT8 199 aaPredicted RBP12.84□□□□□ -0.35
CTNS-202ENST00000381870 RNF150Q9ULK6 438 aa12.84□□□□□ -0.35
CTNS-202ENST00000381870 LRP4O75096 1905 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 IGHV3-20A0A0C4DH32 117 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 KIAA1324LA8MWY0 1029 aaPredicted RBP12.83□□□□□ -0.36
CTNS-202ENST00000381870 HOXB2P14652 356 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 MLF1P58340 268 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 SAPCD1Q5SSQ6 148 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 GPR146Q96CH1 333 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 PXMP4Q9Y6I8 212 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 LNP1A1A4G5 178 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 M0R135 149 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 PDCD6O75340 191 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 PDGFBP01127 241 aaPredicted RBP12.83□□□□□ -0.36
CTNS-202ENST00000381870 TCN2P20062 427 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 C17orf67Q0P5P2 114 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 MALLQ13021 153 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 HIST3H3Q16695 136 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 TMEM183BQ1AE95 376 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 LRRC75BQ2VPJ9 315 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 KCNIP4Q6PIL6 250 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 WDR5BQ86VZ2 330 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 YAF2Q8IY57 180 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 VN1R17PQ8TDU5 208 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 ZNF799Q96GE5 643 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 PLSCR2Q9NRY7 297 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 WNT16Q9UBV4 365 aa12.83□□□□□ -0.36
CTNS-202ENST00000381870 F5P12259 2224 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 SLC22A20A6NK97 555 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 SCTP09683 121 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 PSMB3P49720 205 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 Q6ZRM9 215 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 SHISA6Q6ZSJ9 500 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 SPSB1Q96BD6 273 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 WDYHV1Q96HA8 205 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 GABRG3Q99928 467 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 VAMP8Q9BV40 100 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 SLC25A22Q9H936 323 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 TP53TG3Q9ULZ0 132 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 DUXBA0A1W2PPF3 345 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 TMEM250H0YL14 139 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 ADMP35318 185 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 SERF2P84101 59 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 MMDQ15546 238 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 PHYHD1Q5SRE7 291 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 TMEM211Q6ICI0 200 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 GJC3Q8NFK1 279 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 BORCS8Q96FH0 119 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 RBM24Q9BX46 236 aaKnown RBP12.82□□□□□ -0.36
CTNS-202ENST00000381870 PCED1AQ9H1Q7 454 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 MSL2Q9HCI7 577 aa12.82□□□□□ -0.36
CTNS-202ENST00000381870 C1QTNF9BB2RNN3 333 aa12.81□□□□□ -0.36
CTNS-202ENST00000381870 OR7C1O76099 320 aaPredicted RBP12.81□□□□□ -0.36
CTNS-202ENST00000381870 NDUFB8O95169 186 aa12.81□□□□□ -0.36
CTNS-202ENST00000381870 LCN2P80188 198 aa12.81□□□□□ -0.36
CTNS-202ENST00000381870 OR8B8Q15620 311 aa12.81□□□□□ -0.36
CTNS-202ENST00000381870 ACSF3Q4G176 576 aaPredicted RBP12.81□□□□□ -0.36
CTNS-202ENST00000381870 Q6ZSR3 168 aa12.81□□□□□ -0.36
CTNS-202ENST00000381870 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.81□□□□□ -0.36
CTNS-202ENST00000381870 C22orf15Q8WYQ4 148 aa12.81□□□□□ -0.36
CTNS-202ENST00000381870 HSPB9Q9BQS6 159 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms