RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 CHCHD3Q9NX63 227 aaKnown RBP11.16□□□□□ -0.62
SHOX-202ENST00000381575 ETAA1Q9NY74 926 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 CKLFQ9UBR5 152 aa11.16□□□□□ -0.62
SHOX-202ENST00000381575 TRBV5-7A0A0A0MS05 114 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 IRGMA1A4Y4 181 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 EBAG9O00559 213 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 FSTP19883 344 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 GPR12P47775 334 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 DEFB136Q30KP8 78 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 SYT6Q5T7P8 510 aaPredicted RBP11.15□□□□□ -0.63
SHOX-202ENST00000381575 AWAT2Q6E213 333 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 RAB12Q6IQ22 244 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 IZUMO1Q8IYV9 350 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 STX19Q8N4C7 294 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 Q8N6K4 173 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 Q8N9W7 124 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 TMEM104Q8NE00 496 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 OR51D1Q8NGF3 324 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 OR52M1Q8NGK5 317 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 RCC2Q9P258 522 aaKnown RBP11.15□□□□□ -0.63
SHOX-202ENST00000381575 GNG12Q9UBI6 72 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 TRAPPC2LQ9UL33 140 aa11.15□□□□□ -0.63
SHOX-202ENST00000381575 UBE2QL1A1L167 161 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 MCRIP1C9JLW8 97 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 ORC5O43913 435 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 CRTAPO75718 401 aaPredicted RBP11.14□□□□□ -0.63
SHOX-202ENST00000381575 HBZP02008 142 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 RPLP1P05386 114 aaKnown RBP11.14□□□□□ -0.63
SHOX-202ENST00000381575 RCC1P18754 421 aaPredicted RBP11.14□□□□□ -0.63
SHOX-202ENST00000381575 ZNF134P52741 427 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 RAB25P57735 213 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 ADARB1P78563 741 aaKnown RBP11.14□□□□□ -0.63
SHOX-202ENST00000381575 EBI3Q14213 229 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 INSL4Q14641 139 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 GNMTQ14749 295 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 YIF1BQ5BJH7 314 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 LAIR2Q6ISS4 152 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 AHSA2Q719I0 299 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 FOXRED2Q8IWF2 684 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 DHRSXQ8N5I4 330 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 LINC00311Q8N616 119 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 ZNF439Q8NDP4 499 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 OR2T10Q8NGZ9 312 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 ST6GALNAC6Q969X2 333 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 FAM46BQ96A09 425 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 HSPB9Q9BQS6 159 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 SELENOIQ9C0D9 397 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 PEX16Q9Y5Y5 336 aa11.14□□□□□ -0.63
SHOX-202ENST00000381575 KMT2CQ8NEZ4 4911 aaKnown RBP11.13□□□□□ -0.63
SHOX-202ENST00000381575 ZNF780AO75290 641 aaPredicted RBP11.13□□□□□ -0.63
SHOX-202ENST00000381575 GPX5O75715 221 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 MGMTP16455 207 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 CELP19835 753 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 IL3RAP26951 378 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 SLC35B1P78383 322 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 RCN1Q15293 331 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 CT45A1Q5HYN5 189 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 TTC23Q5W5X9 447 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 SIGIRRQ6IA17 410 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 TGIF2LXQ8IUE1 241 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 SETD9Q8NE22 299 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 CT45A3Q8NHU0 189 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 TFAP2CQ92754 450 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 RAX2Q96IS3 184 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 DERL3Q96Q80 235 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 ABCG5Q9H222 651 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 PLSCR3Q9NRY6 295 aa11.13□□□□□ -0.63
SHOX-202ENST00000381575 AP4M1O00189 453 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 SPINT2O43291 252 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 DUS4LO95620 317 aaKnown RBP11.12□□□□□ -0.63
SHOX-202ENST00000381575 MOSP00540 346 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 SLC2A2P11168 524 aaPredicted RBP11.12□□□□□ -0.63
SHOX-202ENST00000381575 MYF6P23409 242 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 F2RL1P55085 397 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 EGFEM1PQ0D2K5 195 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 MED21Q13503 144 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 GPR176Q14439 515 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 SLC25A48Q6ZT89 311 aaKnown RBP11.12□□□□□ -0.63
SHOX-202ENST00000381575 ZNF695Q8IW36 515 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 S1PR3Q99500 378 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 P2RX4Q99571 388 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 KCNK15Q9H427 330 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 LIN7CQ9NUP9 197 aaKnown RBP11.12□□□□□ -0.63
SHOX-202ENST00000381575 SORL1Q92673 2214 aa11.12□□□□□ -0.63
SHOX-202ENST00000381575 MYL12BO14950 172 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 CD1BP29016 333 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 PPP1CCP36873 323 aaKnown RBP11.11□□□□□ -0.63
SHOX-202ENST00000381575 CAPGP40121 348 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 NKAPLQ5M9Q1 402 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 C6orf183Q5T699 404 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 FAM27D1Q5T7N8 215 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 OR10K2Q6IF99 312 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 C8orf31Q8N9H6 132 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 BPIFB6Q8NFQ5 453 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 OR52L2PQ8NGH6 319 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 DPF1Q92782 380 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 Q96M66 194 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 TAF9BQ9HBM6 251 aa11.11□□□□□ -0.63
SHOX-202ENST00000381575 SPACA1Q9HBV2 294 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms