RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CHMP1AQ9HD42 196 aaPredicted RBP15.23■□□□□ 0.03
SSU72-203ENST00000378725 RAB9BQ9NP90 201 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 C12orf4Q9NQ89 552 aa15.23■□□□□ 0.03
SSU72-203ENST00000378725 ZFHX3Q15911 3703 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 MDFIC2A0A1B0GVS7 189 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 H3BMQ9 156 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 IGLV1-47P01700 117 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 ARG1P05089 322 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 CD3GP09693 182 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 NFYBP25208 207 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 HMGN3Q15651 99 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 TMEM30BQ3MIR4 351 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 UBE2NLQ5JXB2 153 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 MOB1BQ7L9L4 216 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 OR1L1Q8NH94 360 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 RBM38Q9H0Z9 239 aaKnown RBP15.22■□□□□ 0.03
SSU72-203ENST00000378725 MEGF9Q9H1U4 602 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 Q9N2K0 584 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 MGAT4AQ9UM21 535 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 FAM96BQ9Y3D0 163 aa15.22■□□□□ 0.03
SSU72-203ENST00000378725 TBL2Q9Y4P3 447 aaKnown RBP15.22■□□□□ 0.03
SSU72-203ENST00000378725 SETD2Q9BYW2 2564 aaPredicted RBP15.22■□□□□ 0.03
SSU72-203ENST00000378725 MXRA5Q9NR99 2828 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 GSTP1P09211 210 aaKnown RBP15.21■□□□□ 0.03
SSU72-203ENST00000378725 PRRX1P54821 245 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 LGALS4P56470 323 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 HTD2P86397 168 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 LTC4SQ16873 150 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 Q3ZCU0 254 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 LDLRAD2Q5SZI1 272 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 MINOS1Q5TGZ0 78 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 HACD4Q5VWC8 232 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 RBMS3Q6XE24 437 aaKnown RBP15.21■□□□□ 0.03
SSU72-203ENST00000378725 C5orf24Q7Z6I8 188 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 LDLRAD3Q86YD5 345 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 SAMD12Q8N8I0 201 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 BEND2Q8NDZ0 799 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 OR9G1Q8NH87 305 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 UBALD1Q8TB05 177 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 ZNF596Q8TC21 504 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 DYNC2LI1Q8TCX1 351 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 C17orf50Q8WW18 174 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 AP3S1Q92572 193 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 MALSU1Q96EH3 234 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 S100A16Q96FQ6 103 aaKnown RBP15.21■□□□□ 0.03
SSU72-203ENST00000378725 JMJD8Q96S16 334 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 DIABLOQ9NR28 239 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 GFOD1Q9NXC2 390 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 COMMD3Q9UBI1 195 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 MINOS1-NBL1R4GNA1 71 aa15.21■□□□□ 0.03
SSU72-203ENST00000378725 A0A075B6Q4 140 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 FAM172BPA6NC97 362 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 SDCBPO00560 298 aaPredicted RBP15.2■□□□□ 0.02
SSU72-203ENST00000378725 NOL3O60936 208 aaKnown RBP15.2■□□□□ 0.02
SSU72-203ENST00000378725 VENTXO95231 258 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 MELTFP08582 738 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 FBP1P09467 338 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 SRSF7Q16629 238 aaKnown RBP eCLIP15.2■□□□□ 0.02
SSU72-203ENST00000378725 PNLIPRP3Q17RR3 467 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 LHFPL4Q7Z7J7 247 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 ZDHHC22Q8N966 263 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 C8orf31Q8N9H6 132 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 OR4P4Q8NGL7 312 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 ZDHHC16Q969W1 377 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 PHF21AQ96BD5 680 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 ESM1Q9NQ30 184 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 ELF5Q9UKW6 265 aaPredicted RBP15.2■□□□□ 0.02
SSU72-203ENST00000378725 PSG11Q9UQ72 335 aa15.2■□□□□ 0.02
SSU72-203ENST00000378725 CUBNO60494 3623 aa15.19■□□□□ 0.02
SSU72-203ENST00000378725 TRAV18A0A075B6X5 111 aa15.19■□□□□ 0.02
SSU72-203ENST00000378725 J3QR06 171 aa15.19■□□□□ 0.02
SSU72-203ENST00000378725 TOR1AO14656 332 aa15.19■□□□□ 0.02
SSU72-203ENST00000378725 XRCC3O43542 346 aa15.19■□□□□ 0.02
SSU72-203ENST00000378725 FCGR3AP08637 254 aa15.19■□□□□ 0.02
SSU72-203ENST00000378725 MRPS15P82914 257 aaKnown RBP15.19■□□□□ 0.02
SSU72-203ENST00000378725 HLA-DRB5Q30154 266 aa15.19■□□□□ 0.02
SSU72-203ENST00000378725 MZT2AQ6P582 158 aa15.19■□□□□ 0.02
SSU72-203ENST00000378725 PRR18Q8N4B5 295 aa15.19■□□□□ 0.02
SSU72-203ENST00000378725 SETD6Q8TBK2 473 aa15.19■□□□□ 0.02
SSU72-203ENST00000378725 LEAP2Q969E1 77 aa15.19■□□□□ 0.02
SSU72-203ENST00000378725 GALMQ96C23 342 aa15.19■□□□□ 0.02
SSU72-203ENST00000378725 TRDCB7Z8K6 153 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 LY6LH3BQJ8 138 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 BUB1B-PAK6H3BSN5 160 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 CLDN34H7C241 214 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 ZNF701M0R085 212 aaPredicted RBP15.18■□□□□ 0.02
SSU72-203ENST00000378725 APOA1P02647 267 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 HTR1DP28221 377 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 SOX6P35712 828 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 PITPNAQ00169 270 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 BAMBIQ13145 260 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 ARFRP1Q13795 201 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 KIAA2026Q5HYC2 2103 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 LY6G6FQ5SQ64 297 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 FAM53AQ6NSI3 398 aaPredicted RBP15.18■□□□□ 0.02
SSU72-203ENST00000378725 Q6ZS49 121 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 DYNAPQ8N1N2 210 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 LINC00311Q8N616 119 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 CREB3L1Q96BA8 519 aa15.18■□□□□ 0.02
SSU72-203ENST00000378725 OR2S2Q9NQN1 319 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms