RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 SLC2A8Q9NY64 477 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 A0A0B4J293 547 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 SCGB1C2P0DMR2 95 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 CHRNA7P36544 502 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 SLC25A40Q8TBP6 338 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 SLC7A10Q9NS82 523 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 RPEQ96AT9 228 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 OR10C1Q96KK4 312 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 TMEM191AQ9H0A3 160 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 SMDT1Q9H4I9 107 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 HES4Q9HCC6 221 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 PARP11Q9NR21 331 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 DOCK6Q96HP0 2047 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 OR5H1A6NKK0 313 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 FSTP19883 344 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 MPV17LQ2QL34 196 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 FAM74A3Q4VXF1 159 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 FAM78BQ5VT40 261 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 ABLIM2Q6H8Q1 611 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 MDP1Q86V88 176 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 RAB24Q969Q5 203 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 MRPL24Q96A35 216 aaKnown RBP13.09□□□□□ -0.31
NPHP4-201ENST00000378156 HDHD3Q9BSH5 251 aaPredicted RBP13.09□□□□□ -0.31
NPHP4-201ENST00000378156 ONECUT1Q9UBC0 465 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 TRAV38-1A0A0B4J264 116 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 TRAV34A0A0B4J273 112 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 GYPAP02724 150 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 IGKV3-11P04433 115 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 TMEM267Q0VDI3 215 aaPredicted RBP13.09□□□□□ -0.31
NPHP4-201ENST00000378156 ELOBQ15370 118 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 TMEM97Q5BJF2 176 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 NR2C2APQ86WQ0 139 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 DYRK2Q92630 601 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 TMEM56Q96MV1 263 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 TMEM147Q9BVK8 224 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 CACNG5Q9UF02 275 aa13.09□□□□□ -0.31
NPHP4-201ENST00000378156 A0A0G2JK05 382 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 FAM74A7A6NL05 159 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 TRDCB7Z8K6 153 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 NMBP08949 121 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 HLA-GP17693 338 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 OR10J1P30954 320 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 POLR2GP62487 172 aaKnown RBP eCLIP13.08□□□□□ -0.32
NPHP4-201ENST00000378156 FOXO1Q12778 655 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 LIAT1Q6ZQX7 453 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 OR10G4Q8NGN3 311 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 OR10G9Q8NGN4 311 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 OR10G7Q8NGN6 311 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 RAB1CQ92928 201 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 TMEM230Q96A57 120 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 PTX4Q96A99 478 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 ACY3Q96HD9 319 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 KCNK17Q96T54 332 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 RAB1BQ9H0U4 201 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 TGFBR3LH3BV60 316 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 BMPR1BO00238 502 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 TIAF1O95411 115 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 PRSS50Q9UI38 385 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 TNFSF18Q9UNG2 199 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 ACACAQ13085 2346 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 VWA1Q6PCB0 445 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 LRP11Q86VZ4 500 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 ISOC2Q96AB3 205 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 FKBP11Q9NYL4 201 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 STARD10Q9Y365 291 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 C16orf97H3BN30 126 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 ADAM11O75078 769 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 BCL3P20749 454 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 PSG4Q00888 419 aa13.08□□□□□ -0.32
NPHP4-201ENST00000378156 MS4A18H0YCH9 400 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 IGHV3-13P01766 116 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 IGHV3-7P01780 117 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 OR5AL1P0C617 328 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 COX6A1P12074 109 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 UCNP55089 124 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 PCOLCEQ15113 449 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 MS4A18Q3C1V0 323 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 PIGYQ3MUY2 71 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 OVCH2Q7RTZ1 564 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 OR2T6Q8NHC8 308 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 PRSS3P2Q8NHM4 247 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 RPLP1P05386 114 aaKnown RBP13.07□□□□□ -0.32
NPHP4-201ENST00000378156 FAM214BQ7L5A3 538 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 LIPGQ9Y5X9 500 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 A0A0U1RQV5 110 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 LRRC3CA6NJW4 275 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 HAND1O96004 215 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 PGA4P0DJD7 388 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 ZNF658BQ4V348 819 aaPredicted RBP13.07□□□□□ -0.32
NPHP4-201ENST00000378156 MOGAT3Q86VF5 341 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 ZNF383Q8NA42 475 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 VAX2Q9UIW0 290 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 TMPRSS2O15393 492 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 ZNF25P17030 456 aaPredicted RBP13.07□□□□□ -0.32
NPHP4-201ENST00000378156 H2BFSP57053 126 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 LRFN3Q9BTN0 628 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 OR2J1Q9GZK6 312 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 AAMDCQ9H7C9 122 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 SAP30LQ9HAJ7 183 aa13.07□□□□□ -0.32
NPHP4-201ENST00000378156 IL36GQ9NZH8 169 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms