RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 OR51I2Q9H344 312 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 SLC25A22Q9H936 323 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 GOLT1BQ9Y3E0 138 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 A0A1W2PPC4 97 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 SERPINE2P07093 398 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 UCP1P25874 307 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 OTX1P32242 354 aaPredicted RBP13.6□□□□□ -0.23
CKAP4-201ENST00000378026 ESPL1Q14674 2120 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 RAB35Q15286 201 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 SPANXN5Q5MJ07 72 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 OR8G2PQ6IF36 304 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 PARLQ9H300 379 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 PSENENQ9NZ42 101 aa13.6□□□□□ -0.23
CKAP4-201ENST00000378026 UBE2L5PA0A1B0GUS4 154 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 B4E171 279 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 ETV2O00321 342 aaPredicted RBP13.59□□□□□ -0.23
CKAP4-201ENST00000378026 IFNA1P01562 189 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 TSPAN7P41732 249 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 RPS16P62249 146 aaKnown RBP13.59□□□□□ -0.23
CKAP4-201ENST00000378026 MEF2BQ02080 365 aaPredicted RBP13.59□□□□□ -0.23
CKAP4-201ENST00000378026 OR2T10Q8NGZ9 312 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 IL22RA2Q969J5 263 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 SDSLQ96GA7 329 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 SEMA5BQ9P283 1151 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 CACNG5Q9UF02 275 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 MTCH2Q9Y6C9 303 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 MARCH11A6NNE9 402 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 ZNF92Q03936 586 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 CYP2G1PQ6ZSU1 146 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 MBD3L1Q8WWY6 194 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 P2RX4Q99571 388 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 CD207Q9UJ71 328 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 EML6Q6ZMW3 1958 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 ATG2AQ2TAZ0 1938 aa13.59□□□□□ -0.23
CKAP4-201ENST00000378026 NUPR1O60356 82 aa13.58□□□□□ -0.23
CKAP4-201ENST00000378026 PGLYRP1O75594 196 aaPredicted RBP13.58□□□□□ -0.23
CKAP4-201ENST00000378026 DEFA4P12838 97 aa13.58□□□□□ -0.23
CKAP4-201ENST00000378026 B4GALT1P15291 398 aa13.58□□□□□ -0.23
CKAP4-201ENST00000378026 MRPS21P82921 87 aaKnown RBP13.58□□□□□ -0.23
CKAP4-201ENST00000378026 SHHQ15465 462 aa13.58□□□□□ -0.23
CKAP4-201ENST00000378026 ADPRHL1Q8NDY3 354 aa13.58□□□□□ -0.23
CKAP4-201ENST00000378026 NFAM1Q8NET5 270 aaPredicted RBP13.58□□□□□ -0.23
CKAP4-201ENST00000378026 MRPL30Q8TCC3 161 aaKnown RBP13.58□□□□□ -0.23
CKAP4-201ENST00000378026 C10orf35Q96D05 121 aa13.58□□□□□ -0.23
CKAP4-201ENST00000378026 ACY3Q96HD9 319 aa13.58□□□□□ -0.23
CKAP4-201ENST00000378026 HRASP01112 189 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 IGKV1D-33P01593 117 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 IGKV1-33P01594 117 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 EGR1P18146 543 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 RELQ04864 619 aaPredicted RBP13.58□□□□□ -0.24
CKAP4-201ENST00000378026 COA6Q5JTJ3 125 aaKnown RBP13.58□□□□□ -0.24
CKAP4-201ENST00000378026 RAET1LQ5VY80 246 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 ZNF525Q8N782 197 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 IL1F10Q8WWZ1 152 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 OR4C12Q96R67 309 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 TBX15Q96SF7 602 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 TMEM106CQ9BVX2 250 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 BRWD1Q9NSI6 2320 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 KBTBD11O94819 623 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 MSX1P28360 303 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 CNN1P51911 297 aaKnown RBP13.58□□□□□ -0.24
CKAP4-201ENST00000378026 UBALD1Q8TB05 177 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 PYGO2Q9BRQ0 406 aa13.58□□□□□ -0.24
CKAP4-201ENST00000378026 PTRH2Q9Y3E5 179 aaKnown RBP13.58□□□□□ -0.24
CKAP4-201ENST00000378026 ZNF32P17041 273 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 BCL3P20749 454 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 DRD1P21728 446 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 PCP4P48539 62 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 PMP22Q01453 160 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 TDRG1Q3Y452 100 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 SLC25A53Q5H9E4 307 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 FAM78BQ5VT40 261 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 HAPLN4Q86UW8 402 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 ZDHHC23Q8IYP9 409 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 PRR18Q8N4B5 295 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 RPP25LQ8N5L8 163 aaKnown RBP13.57□□□□□ -0.24
CKAP4-201ENST00000378026 ALKBH3Q96Q83 286 aaPredicted RBP13.57□□□□□ -0.24
CKAP4-201ENST00000378026 NAGKQ9UJ70 344 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 FRYLO94915 3013 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 IGKV1-6A0A0C4DH72 117 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 OR3A1P47881 315 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 DAZAP2Q15038 168 aaPredicted RBP13.57□□□□□ -0.24
CKAP4-201ENST00000378026 MS4A10Q96PG2 267 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 PLSCR2Q9NRY7 297 aa13.57□□□□□ -0.24
CKAP4-201ENST00000378026 DLEU1O43261 78 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 GYPAP02724 150 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 CCNOP22674 350 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 VEGFBP49765 207 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 TMEM41BQ5BJD5 291 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 ACTL10Q5JWF8 245 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 GBGT1Q8N5D6 347 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 OR1F12Q8NHA8 337 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 ABHD14BQ96IU4 210 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 OR6C3Q9NZP0 311 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 IGHV1OR21-1A0A087WYE8 117 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 TRAV39A0A0B4J263 110 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 A0A0U1RQK1 487 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 ZNF320A2RRD8 509 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 CLEC18AA5D8T8 446 aa13.56□□□□□ -0.24
CKAP4-201ENST00000378026 SYNGR2O43760 224 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms