RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 TCN2P20062 427 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 SOX8P57073 446 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 MMDQ15546 238 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 AARDQ4LEZ3 155 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 ZNF525Q8N782 197 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 STPG4Q8N801 248 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 MRPL30Q8TCC3 161 aaKnown RBP13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 IMMP2LQ96T52 175 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 RBM24Q9BX46 236 aaKnown RBP13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 PCED1AQ9H1Q7 454 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 PTRH2Q9Y3E5 179 aaKnown RBP13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 PXMP4Q9Y6I8 212 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 IGKV3D-11A0A0A0MRZ8 115 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 COL9A1P20849 921 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 CEACAM8P31997 349 aaPredicted RBP13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 COMPP49747 757 aaPredicted RBP13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 BATF2Q8N1L9 274 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 LHX4Q969G2 390 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 RNF150Q9ULK6 438 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 RNF114Q9Y508 228 aa13.43□□□□□ -0.26
CSNK1A1-202ENST00000377843 TRAF3IP2O43734 574 aaPredicted RBP13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 TDGF1P13385 188 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 VDAC1P21796 283 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 MLF1P58340 268 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 BPIFB3P59826 476 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 GRB2P62993 217 aaKnown RBP13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 HHEXQ03014 270 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 SNAI3Q3KNW1 292 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 Q6ZVH6 145 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 RPP25LQ8N5L8 163 aaKnown RBP13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 SCGB1C1Q8TD33 95 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 ALKBH4Q9NXW9 302 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 A0A1W2PNV4 684 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 SRP14P37108 136 aaKnown RBP13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 FOXL2P58012 376 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 C1orf61Q13536 156 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 DAZAP2Q15038 168 aaPredicted RBP13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 ETFRF1Q6IPR1 90 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 TDHQ8IZJ6 230 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 CMTM2Q8TAZ6 248 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 VN1R17PQ8TDU5 208 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 TMEM234Q8WY98 164 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 SLC35E1Q96K37 410 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 GABRG3Q99928 467 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 RP1P56715 2156 aa13.42□□□□□ -0.26
CSNK1A1-202ENST00000377843 A0A0U1RQK1 487 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 ZNF320A2RRD8 509 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 TMEM150CB9EJG8 249 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 IFNA1P01562 189 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 FOSL2P15408 326 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 ADMP35318 185 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 SELENOTP62341 195 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 TMEM41BQ5BJD5 291 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 TMEM196Q5HYL7 178 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 ANAPC16Q96DE5 110 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 UBE2ZQ9H832 354 aaPredicted RBP13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 A0A0U1RQV5 110 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 IAPPP10997 89 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 NPPCP23582 126 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 UCP1P25874 307 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 RPS18P62269 152 aaKnown RBP13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 Q6ZRM9 215 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 OR2AE1Q8NHA4 323 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 WNT16Q9UBV4 365 aa13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 NCOA6Q14686 2063 aaPredicted RBP13.41□□□□□ -0.26
CSNK1A1-202ENST00000377843 WDFY4Q6ZS81 3184 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 C1QTNF9BB2RNN3 333 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 CTSSP25774 331 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 KIR2DL1P43626 348 aaPredicted RBP13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 UBE2NP61088 152 aaKnown RBP13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 TMEM183BQ1AE95 376 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 TMEM144Q7Z5S9 345 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 SLC22A18ASQ8N1D0 253 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 OR4F5Q8NH21 305 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 EXTL1Q92935 676 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 GPR146Q96CH1 333 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 DDIT4LQ96D03 193 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 WDYHV1Q96HA8 205 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 OR4F4Q96R69 305 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 HSPB9Q9BQS6 159 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 PSMG3Q9BT73 122 aaPredicted RBP13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 VAMP8Q9BV40 100 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 GAL3ST2Q9H3Q3 398 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 A0A1W2PNR3 127 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 ANKUB1A6NFN9 424 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 TNFRSF10CO14798 259 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 WNT2P09544 360 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 FBXW4P57775 412 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 ZNF441Q8N8Z8 693 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 AGBL5Q8NDL9 886 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 OR1L6Q8NGR2 347 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 ALKBH3Q96Q83 286 aaPredicted RBP13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 CCL28Q9NRJ3 127 aa13.4□□□□□ -0.26
CSNK1A1-202ENST00000377843 NKX6-3A6NJ46 265 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 TMEM250H0YL14 139 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 ITGB1BP1O14713 200 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 PDGFBP01127 241 aaPredicted RBP13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 KCNMB1Q16558 191 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 LRRC75BQ2VPJ9 315 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 ACSF3Q4G176 576 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms