RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 SOX2P48431 317 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 CFHR3Q02985 330 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 ZNF816Q0VGE8 651 aaPredicted RBP7.47□□□□□ -1.21
C9orf85-202ENST00000377027 SMN1Q16637 294 aaKnown RBP7.47□□□□□ -1.21
C9orf85-202ENST00000377027 DEFB136Q30KP8 78 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 CCDC144NLQ6NUI1 221 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 C5orf24Q7Z6I8 188 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 SERPINA12Q8IW75 414 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 STPG2Q8N412 459 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 CBR4Q8N4T8 237 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 Q8N9W7 124 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 SUMF2Q8NBJ7 301 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 OR13C5Q8NGS8 318 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 OR5AK2Q8NH90 309 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 TNFAIP8L1Q8WVP5 186 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 CREB3L1Q96BA8 519 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 B9D2Q9BPU9 175 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 MRPS18AQ9NVS2 196 aaKnown RBP7.47□□□□□ -1.21
C9orf85-202ENST00000377027 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.47□□□□□ -1.21
C9orf85-202ENST00000377027 DHDHQ9UQ10 334 aa7.47□□□□□ -1.21
C9orf85-202ENST00000377027 IGHV3-43A0A0B4J1X8 118 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 TMEM212A6NML5 194 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 DYNC1I1O14576 645 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 GEMIN2O14893 280 aaKnown RBP7.46□□□□□ -1.22
C9orf85-202ENST00000377027 OCM2P0CE71 109 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 OCMP0CE72 109 aaPredicted RBP7.46□□□□□ -1.22
C9orf85-202ENST00000377027 FAM106CPP0CH98 169 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 IGHV3-43DP0DP04 118 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 VHLP40337 213 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 ETV1P50549 477 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 LUMP51884 338 aaPredicted RBP7.46□□□□□ -1.22
C9orf85-202ENST00000377027 ARHGDIBP52566 201 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 RBM11P57052 281 aaKnown RBP7.46□□□□□ -1.22
C9orf85-202ENST00000377027 MADCAM1Q13477 382 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 DEFB121Q5J5C9 76 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 NHLRC3Q5JS37 347 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 OR2G6Q5TZ20 316 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 IZUMO1Q8IYV9 350 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 OR8H3Q8N146 312 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 ZNF439Q8NDP4 499 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 KLHL30-AS1Q8NEE0 82 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 OR5D14Q8NGL3 314 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 TSEN15Q8WW01 171 aaKnown RBP7.46□□□□□ -1.22
C9orf85-202ENST00000377027 HSPB9Q9BQS6 159 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 DPCDQ9BVM2 203 aaPredicted RBP7.46□□□□□ -1.22
C9orf85-202ENST00000377027 IFT22Q9H7X7 185 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 AMMECR1Q9Y4X0 333 aaPredicted RBP7.46□□□□□ -1.22
C9orf85-202ENST00000377027 GMPPBQ9Y5P6 360 aa7.46□□□□□ -1.22
C9orf85-202ENST00000377027 BIRC6Q9NR09 4857 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 SERPINE3A8MV23 424 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 IGFBP3P17936 291 aaPredicted RBP7.45□□□□□ -1.22
C9orf85-202ENST00000377027 RAB3AP20336 220 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 C21orf33P30042 268 aaPredicted RBP7.45□□□□□ -1.22
C9orf85-202ENST00000377027 MYCNOSP40205 109 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 GPR12P47775 334 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 RAB7AP51149 207 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 ZNF134P52741 427 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 RPS11P62280 158 aaKnown RBP eCLIP7.45□□□□□ -1.22
C9orf85-202ENST00000377027 HES1Q14469 280 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 ASPHD1Q5U4P2 390 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 SLC35E3Q7Z769 313 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 SATL1Q86VE3 508 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 LINC00311Q8N616 119 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 RNF152Q8N8N0 203 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 OR10A7Q8NGE5 316 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 CHPT1Q8WUD6 406 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 RTN4IP1Q8WWV3 396 aaPredicted RBP7.45□□□□□ -1.22
C9orf85-202ENST00000377027 C16orf92Q96LL3 132 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 FAM192AQ9GZU8 254 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 ABCG5Q9H222 651 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 FGF20Q9NP95 211 aaPredicted RBP7.45□□□□□ -1.22
C9orf85-202ENST00000377027 PCDHB16Q9NRJ7 776 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 IL36GQ9NZH8 169 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 ST3GAL6Q9Y274 331 aa7.45□□□□□ -1.22
C9orf85-202ENST00000377027 LSM4Q9Y4Z0 139 aaKnown RBP7.45□□□□□ -1.22
C9orf85-202ENST00000377027 TRAV8-7A0A075B6U6 113 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 C12orf77C9JDV5 145 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 CCRL2O00421 344 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 KCNJ3P48549 501 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 F2RL1P55085 397 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 RAB40BQ12829 278 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 KIAA0141Q14154 515 aaPredicted RBP7.44□□□□□ -1.22
C9orf85-202ENST00000377027 RSU1Q15404 277 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 ZNF497Q6ZNH5 498 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 SLC16A12Q6ZSM3 486 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 LYPD6Q86Y78 171 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 TGIF2LXQ8IUE1 241 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 ZNF695Q8IW36 515 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 FAM71E2Q8N5Q1 922 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 ZNF565Q8N9K5 539 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 ZNF485Q8NCK3 441 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 OR10X1Q8NGY0 326 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 MYOZ3Q8TDC0 251 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 HAVCR2Q8TDQ0 301 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 CCDC107Q8WV48 283 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 TMEM106AQ96A25 262 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 BARHL1Q9BZE3 327 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 DCLRE1BQ9H816 532 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 ZFP57Q9NU63 452 aa7.44□□□□□ -1.22
C9orf85-202ENST00000377027 FAM118AQ9NWS6 357 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms