RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TP53I11O14683 189 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 SPRY1O43609 319 aaPredicted RBP11.08□□□□□ -0.64
MSH5-204ENST00000375755 ZIC3O60481 467 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 IGLV3-1P01715 115 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 RFPL3SP0C7P2 107 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 DTYMKP23919 212 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 ERVS71-1P61550 626 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 LCN15Q6UWW0 184 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 THNSL2Q86YJ6 484 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 SPOCK3Q9BQ16 436 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 PYGO2Q9BRQ0 406 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 TMEM208Q9BTX3 173 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 SPRY4Q9C004 299 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 P4HTMQ9NXG6 502 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 ALKBH4Q9NXW9 302 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 ZNF292O60281 2723 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 CNOT1A5YKK6 2376 aaKnown RBP11.08□□□□□ -0.64
MSH5-204ENST00000375755 MPPED1O15442 326 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 ADAM20O43506 726 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 MSX1P28360 303 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 FGF8P55075 233 aaPredicted RBP11.08□□□□□ -0.64
MSH5-204ENST00000375755 ERVFC1-1P60608 527 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 EIF3IQ13347 325 aaKnown RBP11.08□□□□□ -0.64
MSH5-204ENST00000375755 CLEC12BQ2HXU8 276 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 RAET1LQ5VY80 246 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 SLC25A47Q6Q0C1 308 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 DPPA3Q6W0C5 159 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 C16orf82Q7Z2V1 217 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 CCDC71LQ8N9Z2 235 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 UCN2Q96RP3 112 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 TMEM222Q9H0R3 208 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 SH2D2AQ9NP31 389 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 V9GYS6 101 aa11.08□□□□□ -0.64
MSH5-204ENST00000375755 NCOA6Q14686 2063 aaPredicted RBP11.08□□□□□ -0.64
MSH5-204ENST00000375755 F5H5K5 113 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 TNFSF12O43508 249 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 DHRS3O75911 302 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 IGHG1P01857 330 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 HLA-HP01893 362 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 PDLIM4P50479 330 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 HNF4GQ14541 408 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 PRSS8Q16651 343 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 ZNF787Q6DD87 383 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 SSX7Q7RTT5 188 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 YRDCQ86U90 279 aaKnown RBP11.07□□□□□ -0.64
MSH5-204ENST00000375755 H1FOOQ8IZA3 346 aaPredicted RBP11.07□□□□□ -0.64
MSH5-204ENST00000375755 IL22RA1Q8N6P7 574 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 OR10J5Q8NHC4 309 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 WFIKKN1Q96NZ8 548 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 VSIRQ9H7M9 311 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 RPRMQ9NS64 109 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 GOLT1BQ9Y3E0 138 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 PINLYPA6NC86 204 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 DLEU1O43261 78 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 LIFP15018 202 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 HERPUD1Q15011 391 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 ZNF726P1Q15940 193 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 Q6ZPA2 131 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 UEVLDQ8IX04 471 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 MRPL41Q8IXM3 137 aaKnown RBP11.07□□□□□ -0.64
MSH5-204ENST00000375755 TMEM37Q8WXS4 190 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 GPHA2Q96T91 129 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 ATP5SQ99766 215 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 STRADBQ9C0K7 418 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 GPR173Q9NS66 373 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 DEPPQ9NTK1 212 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 A0A1W2PNV4 684 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 ELLP55199 621 aaPredicted RBP11.07□□□□□ -0.64
MSH5-204ENST00000375755 UCP3P55916 312 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 HERV-K104P61576 105 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 GRB2P62993 217 aaKnown RBP11.07□□□□□ -0.64
MSH5-204ENST00000375755 ADIRFQ15847 76 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 BATFQ16520 125 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 SPINK14Q6IE38 97 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 PP6455Q8WZ26 134 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 SIGLEC12Q96PQ1 595 aa11.07□□□□□ -0.64
MSH5-204ENST00000375755 UBE2J1Q9Y385 318 aaPredicted RBP11.07□□□□□ -0.64
MSH5-204ENST00000375755 DSPP15924 2871 aaKnown RBP11.07□□□□□ -0.64
MSH5-204ENST00000375755 CHST1O43916 411 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 MT-CO3P00414 261 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 MTCP1P56278 107 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 IQCJQ1A5X6 159 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 DCAF10Q5QP82 559 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 HES3Q5TGS1 186 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 ETFRF1Q6IPR1 90 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 ZNF695Q8IW36 515 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 SELENOHQ8IZQ5 122 aaKnown RBP11.06□□□□□ -0.64
MSH5-204ENST00000375755 FAM185AQ8N0U4 392 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 PSMF1Q92530 271 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 TMEM18Q96B42 140 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 ELOVL1Q9BW60 279 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 HES7Q9BYE0 225 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 POLR3KQ9Y2Y1 108 aaPredicted RBP11.06□□□□□ -0.64
MSH5-204ENST00000375755 AKAP13Q12802 2813 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 ZFHX2Q9C0A1 2572 aaPredicted RBP11.06□□□□□ -0.64
MSH5-204ENST00000375755 CEBPZOSA8MTT3 80 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 TRAF3IP2O43734 574 aaPredicted RBP11.06□□□□□ -0.64
MSH5-204ENST00000375755 GNB2P62879 340 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 BAXQ07812 192 aa11.06□□□□□ -0.64
MSH5-204ENST00000375755 ATP1A1-AS1Q5TC04 95 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms