RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 FOXB1Q99853 325 aa12.97□□□□□ -0.33
MSH5-203ENST00000375750 NIPSNAP3BQ9BS92 247 aa12.97□□□□□ -0.33
MSH5-203ENST00000375750 URB1O60287 2271 aaKnown RBP12.96□□□□□ -0.33
MSH5-203ENST00000375750 A0A096LPE4 126 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 A0A1W2PPZ6 126 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 PINLYPA6NC86 204 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 ZNF729A6NN14 1252 aaPredicted RBP12.96□□□□□ -0.33
MSH5-203ENST00000375750 CST2P09228 141 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 TRGC1P0CF51 173 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 FABP4P15090 132 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 HAAOP46952 286 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 CARD18P57730 90 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 ZNF506Q5JVG8 444 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 DCAF10Q5QP82 559 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 OR2T2Q6IF00 324 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 ZNF880Q6PDB4 577 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 CCDC54Q8NEL0 328 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 ABHD3Q8WU67 409 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 SLC25A31Q9H0C2 315 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 LRFN1Q9P244 771 aa12.96□□□□□ -0.33
MSH5-203ENST00000375750 RPL36A-HNRNPH2H7BZ11 118 aa12.96□□□□□ -0.34
MSH5-203ENST00000375750 IAPPP10997 89 aa12.96□□□□□ -0.34
MSH5-203ENST00000375750 MMP9P14780 707 aa12.96□□□□□ -0.34
MSH5-203ENST00000375750 RAC1P63000 192 aa12.96□□□□□ -0.34
MSH5-203ENST00000375750 ID3Q02535 119 aa12.96□□□□□ -0.34
MSH5-203ENST00000375750 GAMTQ14353 236 aa12.96□□□□□ -0.34
MSH5-203ENST00000375750 Q6ZRM9 215 aa12.96□□□□□ -0.34
MSH5-203ENST00000375750 OR56B2PQ8NGI1 322 aa12.96□□□□□ -0.34
MSH5-203ENST00000375750 PRDM13Q9H4Q3 707 aa12.96□□□□□ -0.34
MSH5-203ENST00000375750 Q9N2K0 584 aa12.96□□□□□ -0.34
MSH5-203ENST00000375750 ZNF732B4DXR9 585 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 GLIPR1P48060 266 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 WIPI1Q5MNZ9 446 aaPredicted RBP12.95□□□□□ -0.34
MSH5-203ENST00000375750 PLA2G3Q9NZ20 509 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 KIAA1549Q9HCM3 1950 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 ZNF816-ZNF321PA0A0X1KG74 233 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 ZNF716A6NP11 495 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 TRAPPC6AO75865 159 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 TK1P04183 234 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 NUBP1P53384 320 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 FOXG1P55316 489 aaPredicted RBP12.95□□□□□ -0.34
MSH5-203ENST00000375750 B3GALT5-AS1P59052 145 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 ARL16Q0P5N6 197 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 SLC25A24Q6NUK1 477 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 LINC00696Q6ZRV3 163 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 HIST3H2BBQ8N257 126 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 HES7Q9BYE0 225 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 RPRMQ9NS64 109 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 RNF115Q9Y4L5 304 aa12.95□□□□□ -0.34
MSH5-203ENST00000375750 LRRC3CA6NJW4 275 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 HS3ST1O14792 307 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 CD55P08174 381 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 PGA5P0DJD9 388 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 CD200P41217 278 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 CLDN15P56746 228 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 CLEC12BQ2HXU8 276 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 GPR146Q96CH1 333 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 TREM2Q9NZC2 230 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 KIAA2026Q5HYC2 2103 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 MED13Q9UHV7 2174 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 LAMA5O15230 3695 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 HSPB1P04792 205 aaKnown RBP12.94□□□□□ -0.34
MSH5-203ENST00000375750 FKBP2P26885 142 aaKnown RBP12.94□□□□□ -0.34
MSH5-203ENST00000375750 HLA-DRB3P79483 266 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 ZNF726P1Q15940 193 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 FAM90A2PQ658T7 463 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 GGNQ86UU5 652 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 S100PBPQ96BU1 408 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 ATP5SQ99766 215 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 MTCH1Q9NZJ7 389 aa12.94□□□□□ -0.34
MSH5-203ENST00000375750 LOC102723971A0A1B0GUV8 181 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 A0A1W2PR80 420 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 ARGFXA6NJG6 315 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 HMGB3O15347 200 aaKnown RBP12.93□□□□□ -0.34
MSH5-203ENST00000375750 SYNGR1O43759 233 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 PGLYRP1O75594 196 aaPredicted RBP12.93□□□□□ -0.34
MSH5-203ENST00000375750 RNF224P0DH78 156 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 PSG2P11465 335 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 NKX6-1P78426 367 aaPredicted RBP12.93□□□□□ -0.34
MSH5-203ENST00000375750 OR8B8Q15620 311 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 ABHD17BQ5VST6 288 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 BEND4Q6ZU67 534 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 OR1K1Q8NGR3 316 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 RDH5Q92781 318 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 FAM210BQ96KR6 192 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 OR51B6Q9H340 312 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 IL36GQ9NZH8 169 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 ESPL1Q14674 2120 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 ZFHX2Q9C0A1 2572 aaPredicted RBP12.93□□□□□ -0.34
MSH5-203ENST00000375750 NEURL1O76050 574 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 METTL15P1P0C7V9 234 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 TAS2R30P59541 319 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 RAC3P60763 192 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 DEFA6Q01524 100 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 OR10D3Q8NH80 312 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 INTS12Q96CB8 462 aaKnown RBP12.93□□□□□ -0.34
MSH5-203ENST00000375750 SNX22Q96L94 193 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 SPIN2AQ99865 258 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 SPIN2BQ9BPZ2 258 aa12.93□□□□□ -0.34
MSH5-203ENST00000375750 GPR35Q9HC97 309 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms