RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 RCC1LQ96I51 464 aaKnown RBP11.25□□□□□ -0.61
NELFE-201ENST00000375425 EAF1Q96JC9 268 aaPredicted RBP11.25□□□□□ -0.61
NELFE-201ENST00000375425 BANF2Q9H503 90 aa11.25□□□□□ -0.61
NELFE-201ENST00000375425 ETAA1Q9NY74 926 aa11.25□□□□□ -0.61
NELFE-201ENST00000375425 RCC2Q9P258 522 aaKnown RBP11.25□□□□□ -0.61
NELFE-201ENST00000375425 PSORS1C1Q9UIG5 152 aa11.25□□□□□ -0.61
NELFE-201ENST00000375425 PEX16Q9Y5Y5 336 aa11.25□□□□□ -0.61
NELFE-201ENST00000375425 C12orf77C9JDV5 145 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 SPINT2O43291 252 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 MPIG6BO95866 241 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 VHLP40337 213 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 ZNF134P52741 427 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 DOC2BQ14184 412 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 SLC35E3Q7Z769 313 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 LYPD6Q86Y78 171 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 PRR18Q8N4B5 295 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 TMEM104Q8NE00 496 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 BPIFB6Q8NFQ5 453 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 OR2T10Q8NGZ9 312 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 RTN4IP1Q8WWV3 396 aaPredicted RBP11.24□□□□□ -0.61
NELFE-201ENST00000375425 DERL3Q96Q80 235 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 SELENOIQ9C0D9 397 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 DNAH9Q9NYC9 4486 aa11.24□□□□□ -0.61
NELFE-201ENST00000375425 ZNF736B4DX44 427 aaPredicted RBP11.23□□□□□ -0.61
NELFE-201ENST00000375425 MYL12BO14950 172 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 SLC31A2O15432 143 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 CRTAPO75718 401 aaPredicted RBP11.23□□□□□ -0.61
NELFE-201ENST00000375425 DUS4LO95620 317 aaKnown RBP11.23□□□□□ -0.61
NELFE-201ENST00000375425 HBZP02008 142 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 CD1AP06126 327 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 MGMTP16455 207 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 RCC1P18754 421 aaPredicted RBP11.23□□□□□ -0.61
NELFE-201ENST00000375425 IL3RAP26951 378 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 CD1BP29016 333 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 WNT4P56705 351 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 RPL23AP62750 156 aaKnown RBP11.23□□□□□ -0.61
NELFE-201ENST00000375425 SLC35B1P78383 322 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 Q3ZCU0 254 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 SLC25A48Q6ZT89 311 aaKnown RBP11.23□□□□□ -0.61
NELFE-201ENST00000375425 C18orf65Q6ZTR6 163 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 AHSA2Q719I0 299 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 OR2W3Q7Z3T1 314 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 TGIF2LXQ8IUE1 241 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 FOXRED2Q8IWF2 684 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 MRPL41Q8IXM3 137 aaKnown RBP11.23□□□□□ -0.61
NELFE-201ENST00000375425 IZUMO1Q8IYV9 350 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 GAPTQ8N292 157 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 STPG2Q8N412 459 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 Q8N6K4 173 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 NANOGP1Q8N7R0 232 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 LINC00482Q8N8I6 264 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 OR1L1Q8NH94 360 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 FBLIM1Q8WUP2 373 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 RAB9BQ9NP90 201 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 ZFP57Q9NU63 452 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 PLCXD1Q9NUJ7 323 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 GNG12Q9UBI6 72 aa11.23□□□□□ -0.61
NELFE-201ENST00000375425 UBE2QL1A1L167 161 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 FUT3P21217 361 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 THBS3P49746 956 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 KRTAP10-11P60412 298 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 CT45A1Q5HYN5 189 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 C6orf183Q5T699 404 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 OGFRL1Q5TC84 451 aaPredicted RBP11.22□□□□□ -0.61
NELFE-201ENST00000375425 SIGIRRQ6IA17 410 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 ETV3LQ6ZN32 361 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 Q8N9W7 124 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 OR51D1Q8NGF3 324 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 OR10V1Q8NGI7 309 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 CT45A3Q8NHU0 189 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 RBMXL1Q96E39 390 aaKnown RBP11.22□□□□□ -0.61
NELFE-201ENST00000375425 CYYR1Q96J86 154 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 ABCG5Q9H222 651 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 PLSCR3Q9NRY6 295 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 ERGIC3Q9Y282 383 aa11.22□□□□□ -0.61
NELFE-201ENST00000375425 FAM90A10PA6NDY2 464 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 FAM90A7PA6NKC0 464 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 FAM90A23PA8MXZ1 464 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 CA11O75493 328 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 SC5DO75845 299 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 MOSP00540 346 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 GLAP06280 429 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 GPR12P47775 334 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 TMEM30BQ3MIR4 351 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 STEAP3Q658P3 488 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 TEX38Q6PEX7 206 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 C8orf86Q6ZUL3 223 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 COMMD1Q8N668 190 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 ZNF439Q8NDP4 499 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 FAM46BQ96A09 425 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 Q96M66 194 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 UQCC2Q9BRT2 126 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 LIN7CQ9NUP9 197 aaKnown RBP11.21□□□□□ -0.61
NELFE-201ENST00000375425 FKBP14Q9NWM8 211 aa11.21□□□□□ -0.61
NELFE-201ENST00000375425 NUDT19A8MXV4 375 aa11.2□□□□□ -0.62
NELFE-201ENST00000375425 K7EIL1 84 aa11.2□□□□□ -0.62
NELFE-201ENST00000375425 AP4M1O00189 453 aa11.2□□□□□ -0.62
NELFE-201ENST00000375425 CASQ2O14958 399 aaPredicted RBP11.2□□□□□ -0.62
NELFE-201ENST00000375425 MAPK3P27361 379 aaPredicted RBP11.2□□□□□ -0.62
NELFE-201ENST00000375425 HOXD3P31249 432 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms