RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 HLA-DQA1P01909 254 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 IGHV4-34P06331 123 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 ZNF324BQ6AW86 544 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 MOGAT3Q86VF5 341 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 WDR34Q96EX3 536 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 CNRIP1Q96F85 164 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 ZMIZ1Q9ULJ6 1067 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 FXYD1O00168 92 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 GP1BAP07359 652 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 VMA21Q3ZAQ7 101 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 PTX4Q96A99 478 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 PRDX4Q13162 271 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 RNPS1Q15287 305 aaKnown RBP12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 SLC25A35Q3KQZ1 300 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 LDLRAD2Q5SZI1 272 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 C5orf30Q96GV9 206 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 PNLIPP16233 465 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 NRIP2Q9BQI9 281 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 MIXL1Q9H2W2 232 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 BCL2L10Q9HD36 194 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 SPINT1O43278 529 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 MC5RP33032 325 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 SELENOPP49908 381 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 GRAMD2BQ96HH9 432 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 TTC3P53804 2025 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 KCNE1BA0A087WTH5 132 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 LOC390937A0A1W2PQ73 354 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 MMP16P51512 607 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 MAMSTRQ6ZN01 415 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 ZFP64Q9NPA5 681 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 DOCK5Q9H7D0 1870 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 ALKBH6Q3KRA9 238 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 SPINK14Q6IE38 97 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 TMEM108Q6UXF1 575 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 RBPMS2Q6ZRY4 209 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 ZDHHC16Q969W1 377 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 RAXQ9Y2V3 346 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 COL11A1P12107 1806 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 FAM157CP0CG43 387 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 ATF1P18846 271 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 SP6Q3SY56 376 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 TTC9CQ8N5M4 171 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 GNRHR2Q96P88 292 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 R4GMQ9 66 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 IGF2P01344 180 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 IGFBP7Q16270 282 aa12.38□□□□□ -0.43
RAPGEF1-202ENST00000372190 C3orf85A0A1B0GTC6 90 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 RPL18Q07020 188 aaKnown RBP12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 ZNF415Q09FC8 603 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 XAF1Q6GPH4 301 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 BATF2Q8N1L9 274 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 MRPL30Q8TCC3 161 aaKnown RBP12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 LINC00470Q9BZP3 86 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 MED29Q9NX70 200 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 PLEKHB1Q9UF11 243 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 ANKRD12Q6UB98 2062 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 GUCA2BQ16661 112 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 LGALSLQ3ZCW2 172 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 OSR2Q8N2R0 312 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 DEFB108BQ8NET1 73 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 LSM10Q969L4 123 aaKnown RBP12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 MTFP1Q9UDX5 166 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 PAGE4O60829 102 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 B4GALT1P15291 398 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 MDKP21741 143 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 PRSS41Q7RTY9 318 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 PELI1Q96FA3 418 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 PILRBQ9UKJ0 227 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 ARFGEF1Q9Y6D6 1849 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 LINC00587B1AMM8 73 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 HOXB3P14651 431 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 PSG5Q15238 335 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 SNAI3Q3KNW1 292 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 CLDN23Q96B33 292 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 TMEM204Q9BSN7 226 aa12.37□□□□□ -0.43
RAPGEF1-202ENST00000372190 SHISA8B8ZZ34 492 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 MFAP2P55001 183 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 PRELID3AQ96N28 172 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 CD300CQ08708 224 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 RSPO4Q2I0M5 234 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 RND1Q92730 232 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 SARGQ9BW04 601 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 C20orf141Q9NUB4 165 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 SHROOM3Q8TF72 1996 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 GSTZ1O43708 216 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 SEC11BP0C7V7 166 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 CACNG7P62955 275 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 PUSL1Q8N0Z8 303 aaKnown RBP12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 OR2Z1Q8NG97 314 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 MISP3Q96FF7 219 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 ASCL3Q9NQ33 180 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 ARIH2OSQ8N7S6 290 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 RGP1Q92546 391 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 MRPL18Q9H0U6 180 aaKnown RBP12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 FAM60AQ9NP50 221 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 SCN1AP35498 2009 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 ERGP11308 486 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 FCARP24071 287 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 OTX1P32242 354 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 NTMQ9P121 344 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms