RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 ID4P47928 161 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 HABP2Q14520 560 aaPredicted RBP16.79■□□□□ 0.28
LHX3-202ENST00000371748 SPIN3Q5JUX0 258 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 TMEM268Q5VZI3 342 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 EIF5AL1Q6IS14 154 aaKnown RBP16.79■□□□□ 0.28
LHX3-202ENST00000371748 MSI2Q96DH6 328 aaKnown RBP16.79■□□□□ 0.28
LHX3-202ENST00000371748 TP53RKQ96S44 253 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 GPHA2Q96T91 129 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 BCL2L14Q9BZR8 327 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 MSL2Q9HCI7 577 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 ACACAQ13085 2346 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 TMEM210A6NLX4 147 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 SLC33A1O00400 549 aaPredicted RBP16.79■□□□□ 0.28
LHX3-202ENST00000371748 FOLR2P14207 255 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 EIF5AP63241 154 aaKnown RBP16.79■□□□□ 0.28
LHX3-202ENST00000371748 ETV3LQ6ZN32 361 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 Q6ZR03 302 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 ZNF818PQ6ZRF7 136 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 PLPPR1Q8TBJ4 325 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 WASF3Q9UPY6 502 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 AMDHD2Q9Y303 409 aa16.79■□□□□ 0.28
LHX3-202ENST00000371748 TRBV6-6A0A0A6YYG2 114 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 MPPED1O15442 326 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 FBXO24O75426 580 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 GLAP06280 429 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 CEBPDP49716 269 aaPredicted RBP16.78■□□□□ 0.28
LHX3-202ENST00000371748 ZNF880Q6PDB4 577 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 ZNF565Q8N9K5 539 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 S100PBPQ96BU1 408 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 CNTNAP3Q9BZ76 1288 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 EGLN1Q9GZT9 426 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 OR14J1Q9UGF5 321 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 RP1L1Q8IWN7 2480 aaPredicted RBP16.78■□□□□ 0.28
LHX3-202ENST00000371748 TUSC2O75896 110 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 SCGB1D2O95969 90 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 ACAA1P09110 424 aaPredicted RBP16.78■□□□□ 0.28
LHX3-202ENST00000371748 PAX6P26367 422 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 GCH1P30793 250 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 ZNF83P51522 516 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 F2RL1P55085 397 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 HLA-DRB3P79483 266 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 ZNF718Q3SXZ3 478 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 PRAMEF6Q5VXH4 476 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 PCSK4Q6UW60 755 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 FAM180AQ6UWF9 173 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 MEX3BQ6ZN04 569 aaKnown RBP16.78■□□□□ 0.28
LHX3-202ENST00000371748 GAPTQ8N292 157 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 SCNM1Q9BWG6 230 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 PARP11Q9NR21 331 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 TUBD1Q9UJT1 453 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 TP53TG5Q9Y2B4 290 aa16.78■□□□□ 0.28
LHX3-202ENST00000371748 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.77■□□□□ 0.28
LHX3-202ENST00000371748 C3orf85A0A1B0GTC6 90 aa16.77■□□□□ 0.28
LHX3-202ENST00000371748 HSD17B6O14756 317 aa16.77■□□□□ 0.28
LHX3-202ENST00000371748 WNT9BO14905 357 aa16.77■□□□□ 0.28
LHX3-202ENST00000371748 CTXN2P0C2S0 81 aa16.77■□□□□ 0.28
LHX3-202ENST00000371748 KITLGP21583 273 aa16.77■□□□□ 0.28
LHX3-202ENST00000371748 TBC1D26Q86UD7 250 aa16.77■□□□□ 0.28
LHX3-202ENST00000371748 C11orf53Q8IXP5 236 aa16.77■□□□□ 0.28
LHX3-202ENST00000371748 LRTM2Q8N967 370 aa16.77■□□□□ 0.28
LHX3-202ENST00000371748 KIRREL1Q96J84 757 aa16.77■□□□□ 0.28
LHX3-202ENST00000371748 C18orf12Q96KH6 178 aa16.77■□□□□ 0.28
LHX3-202ENST00000371748 CCL28Q9NRJ3 127 aa16.77■□□□□ 0.28
LHX3-202ENST00000371748 CACFD1Q9UGQ2 172 aa16.77■□□□□ 0.28
LHX3-202ENST00000371748 LSM5Q9Y4Y9 91 aaKnown RBP16.77■□□□□ 0.28
LHX3-202ENST00000371748 MAP1BP46821 2468 aaKnown RBP16.77■□□□□ 0.28
LHX3-202ENST00000371748 SNRPEP62304 92 aaKnown RBP16.77■□□□□ 0.27
LHX3-202ENST00000371748 ZNF146Q15072 292 aa16.77■□□□□ 0.27
LHX3-202ENST00000371748 SWI5Q1ZZU3 235 aa16.77■□□□□ 0.27
LHX3-202ENST00000371748 LGI3Q8N145 548 aa16.77■□□□□ 0.27
LHX3-202ENST00000371748 CXXC4Q9H2H0 198 aa16.77■□□□□ 0.27
LHX3-202ENST00000371748 SMCO4Q9NRQ5 59 aa16.77■□□□□ 0.27
LHX3-202ENST00000371748 A6NLC8 198 aa16.76■□□□□ 0.27
LHX3-202ENST00000371748 OR8U9P0C7N5 309 aa16.76■□□□□ 0.27
LHX3-202ENST00000371748 TIMP3P35625 211 aa16.76■□□□□ 0.27
LHX3-202ENST00000371748 DVL1P1P54792 670 aaPredicted RBP16.76■□□□□ 0.27
LHX3-202ENST00000371748 OR8U1Q8NH10 309 aa16.76■□□□□ 0.27
LHX3-202ENST00000371748 LYPD6BQ8NI32 183 aa16.76■□□□□ 0.27
LHX3-202ENST00000371748 FAM57AQ8TBR7 257 aa16.76■□□□□ 0.27
LHX3-202ENST00000371748 IL1F10Q8WWZ1 152 aa16.76■□□□□ 0.27
LHX3-202ENST00000371748 UFSP2Q9NUQ7 469 aa16.76■□□□□ 0.27
LHX3-202ENST00000371748 M0R1B8 84 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 SH2D1BO14796 132 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 KRTCAP3Q53RY4 240 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 SPACA3Q8IXA5 215 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 PRR18Q8N4B5 295 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 UBALD1Q8TB05 177 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 AKR1E2Q96JD6 320 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 CLCC1Q96S66 551 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 CADP27708 2225 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 KIAA2026Q5HYC2 2103 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 CHD3Q12873 2000 aaKnown RBP16.75■□□□□ 0.27
LHX3-202ENST00000371748 CUL9Q8IWT3 2517 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 RPL12P30050 165 aaKnown RBP16.75■□□□□ 0.27
LHX3-202ENST00000371748 MDH2P40926 338 aaKnown RBP16.75■□□□□ 0.27
LHX3-202ENST00000371748 RAB5BP61020 215 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 ZNF497Q6ZNH5 498 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 Q6ZRG5 221 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 FAM185AQ8N0U4 392 aa16.75■□□□□ 0.27
LHX3-202ENST00000371748 SLC35G3Q8N808 338 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms