RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 AUNIPQ9H7T9 357 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 HEXA-AS1Q9H8Q6 139 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 Q9N2K0 584 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 MBNL3Q9NUK0 354 aaKnown RBP11.36□□□□□ -0.59
TPM3-211ENST00000368531 EXTL2Q9UBQ6 330 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 NUP50Q9UKX7 468 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 IGHV1-69DA0A0B4J2H0 117 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 MEIS3P1A6NDR6 274 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 NPIPB11E5RHQ5 1161 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 SDCBPO00560 298 aaPredicted RBP11.35□□□□□ -0.59
TPM3-211ENST00000368531 SPINT2O43291 252 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 CRLF1O75462 422 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 IGHV1-69P01742 117 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 RBP4P02753 201 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 FCGR3AP08637 254 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 SRD5A1P18405 259 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 GUCA2AQ02747 115 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 PNLIPRP3Q17RR3 467 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 NCR3LG1Q68D85 454 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 OR52W1Q6IF63 320 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 SNX29P2Q8IUI4 249 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 TEX29Q8N6K0 151 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 IL1F10Q8WWZ1 152 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 GCDHQ92947 438 aaPredicted RBP11.35□□□□□ -0.59
TPM3-211ENST00000368531 KIRREL1Q96J84 757 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 ST6GALNAC5Q9BVH7 336 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 TMEM133Q9H2Q1 129 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPM3-211ENST00000368531 ZNF69Q9UC07 566 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 ADAM30Q9UKF2 790 aa11.35□□□□□ -0.59
TPM3-211ENST00000368531 ZANQ9Y493 2812 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 TRBV6-6A0A0A6YYG2 114 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 SSX5O60225 188 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 FSHBP01225 129 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 ARG1P05089 322 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 SCTP09683 121 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 EPHA1P21709 976 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 FPR2P25090 351 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 GNG10P50151 68 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 HMGN3Q15651 99 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 RNASE12Q5GAN4 147 aaKnown RBP11.34□□□□□ -0.59
TPM3-211ENST00000368531 ZNF880Q6PDB4 577 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 CNIH2Q6PI25 160 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 TRAT1Q6PIZ9 186 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 MOB1BQ7L9L4 216 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 ABHD12Q8N2K0 398 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 OR52L2PQ8NGH6 319 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 OR10V1Q8NGI7 309 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 OR13D1Q8NGV5 346 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 DIRAS2Q96HU8 199 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 NXF2Q9GZY0 626 aaKnown RBP11.34□□□□□ -0.59
TPM3-211ENST00000368531 UNKLQ9H9P5 680 aaKnown RBP11.34□□□□□ -0.59
TPM3-211ENST00000368531 ZNF286AQ9HBT8 521 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 MAST4O15021 2626 aa11.34□□□□□ -0.59
TPM3-211ENST00000368531 IGHV2-26A0A0B4J1V2 119 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 A0A1W2PPE3 182 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 NPFFO15130 113 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 HLA-DQB1P01920 261 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 UBE2E1P51965 193 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 HLA-DRB3P79483 266 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 PITPNAQ00169 270 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 GALMQ96C23 342 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 CLEC7AQ9BXN2 247 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 LINC00574Q9H8X3 128 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 RAB9BQ9NP90 201 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 OR2S2Q9NQN1 319 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 ZNRD1Q9P1U0 126 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 GNG12Q9UBI6 72 aa11.33□□□□□ -0.6
TPM3-211ENST00000368531 IGKV1D-8A0A087WSZ0 117 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 MEIOCA2RUB1 952 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 TRDCB7Z8K6 153 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 F2RL2O00254 374 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 TOR1AO14656 332 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 MELTFP08582 738 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 GSTT2P0CG29 244 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 GSTT2BP0CG30 244 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 TNFSF8P32971 234 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 PRSS3P35030 304 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 LGALS4P56470 323 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 GNMTQ14749 295 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 GVQW1Q8N7I0 195 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 MMP27Q9H306 513 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 BATF3Q9NR55 127 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 GFOD1Q9NXC2 390 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 MGAT4AQ9UM21 535 aa11.32□□□□□ -0.6
TPM3-211ENST00000368531 HIVEP2P31629 2446 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 MDFIC2A0A1B0GVS7 189 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 FABP7O15540 132 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 FAM157CP0CG43 387 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 DTYMKP23919 212 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 PAX6P26367 422 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 S100A5P33763 92 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 SAA4P35542 130 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 PPP1CCP36873 323 aaKnown RBP11.31□□□□□ -0.6
TPM3-211ENST00000368531 LOXL3P58215 753 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 CNPY1Q3B7I2 92 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 LHFPL4Q7Z7J7 247 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 ZNF554Q86TJ5 538 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 OR10A7Q8NGE5 316 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 C17orf50Q8WW18 174 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms