RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SSX1Q16384 188 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 CCDC144NLQ6NUI1 221 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 LINC00311Q8N616 119 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 C8orf31Q8N9H6 132 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 TOMM40LQ969M1 308 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 RPEQ96AT9 228 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 RBM14Q96PK6 669 aaKnown RBP15.14■□□□□ 0.01
CKS1B-203ENST00000368439 TM2D1Q9BX74 207 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 ACOT13Q9NPJ3 140 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 BLOC1S6Q9UL45 172 aa15.14■□□□□ 0.01
CKS1B-203ENST00000368439 IGHV3-43A0A0B4J1X8 118 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 SDCBPO00560 298 aaPredicted RBP15.13■□□□□ 0.01
CKS1B-203ENST00000368439 OR2F2O95006 317 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 TSPAN15O95858 294 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 AMY1AP04745 511 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 AMY2AP04746 511 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 IGHV3-43DP0DP04 118 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 VSIG10L2P0DP72 767 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 RCC1P18754 421 aaPredicted RBP15.13■□□□□ 0.01
CKS1B-203ENST00000368439 CHATP28329 748 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 ARHGDIBP52566 201 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 MADCAM1Q13477 382 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 ZNF367Q7RTV3 350 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 THNSL2Q86YJ6 484 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 OR6M1Q8NGM8 313 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 MRPL30Q8TCC3 161 aaKnown RBP15.13■□□□□ 0.01
CKS1B-203ENST00000368439 OCSTAMPQ9BR26 566 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 SLC25A33Q9BSK2 321 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 MBNL3Q9NUK0 354 aaKnown RBP15.13■□□□□ 0.01
CKS1B-203ENST00000368439 TRAPPC2LQ9UL33 140 aa15.13■□□□□ 0.01
CKS1B-203ENST00000368439 DENRO43583 198 aaKnown RBP15.12■□□□□ 0.01
CKS1B-203ENST00000368439 ARL6IP5O75915 188 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 BPNT1O95861 308 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 MNDAP41218 407 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 GABARAPL2P60520 117 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 EMX1Q04741 257 aaPredicted RBP15.12■□□□□ 0.01
CKS1B-203ENST00000368439 TMEM95Q3KNT9 176 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 Q6ZTK2 550 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 C5orf24Q7Z6I8 188 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 C11orf44Q8N8P7 122 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 ZNF439Q8NDP4 499 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 OR1L1Q8NH94 360 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 KCNG3Q8TAE7 436 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 SULT4A1Q9BR01 284 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 NICN1Q9BSH3 213 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 TMEM59Q9BXS4 323 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 MMP27Q9H306 513 aa15.12■□□□□ 0.01
CKS1B-203ENST00000368439 AK6Q9Y3D8 172 aaKnown RBP15.12■□□□□ 0.01
CKS1B-203ENST00000368439 A0A0A6YYD4 124 aa15.11■□□□□ 0.01
CKS1B-203ENST00000368439 H3BUI4 141 aa15.11■□□□□ 0.01
CKS1B-203ENST00000368439 SLC17A2O00624 439 aa15.11■□□□□ 0.01
CKS1B-203ENST00000368439 SLC31A2O15432 143 aa15.11■□□□□ 0.01
CKS1B-203ENST00000368439 HBZP02008 142 aa15.11■□□□□ 0.01
CKS1B-203ENST00000368439 RAB7AP51149 207 aa15.11■□□□□ 0.01
CKS1B-203ENST00000368439 ZNF816Q0VGE8 651 aaPredicted RBP15.11■□□□□ 0.01
CKS1B-203ENST00000368439 Q3ZCU0 254 aa15.11■□□□□ 0.01
CKS1B-203ENST00000368439 C6orf183Q5T699 404 aa15.11■□□□□ 0.01
CKS1B-203ENST00000368439 OR8H3Q8N146 312 aa15.11■□□□□ 0.01
CKS1B-203ENST00000368439 DRAM1Q8N682 238 aa15.11■□□□□ 0.01
CKS1B-203ENST00000368439 OR56B4Q8NH76 319 aa15.11■□□□□ 0.01
CKS1B-203ENST00000368439 ST6GALNAC6Q969X2 333 aa15.11■□□□□ 0.01
CKS1B-203ENST00000368439 HSD17B6O14756 317 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 MRPS14O60783 128 aaKnown RBP15.1■□□□□ 0.01
CKS1B-203ENST00000368439 SNRNP70P08621 437 aaKnown RBP15.1■□□□□ 0.01
CKS1B-203ENST00000368439 CALRP27797 417 aaKnown RBP15.1■□□□□ 0.01
CKS1B-203ENST00000368439 ZNF134P52741 427 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 P2RY14Q15391 338 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 TMEM30BQ3MIR4 351 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 NKAPLQ5M9Q1 402 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 TRAT1Q6PIZ9 186 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 CD200R1LQ6Q8B3 271 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 Q6ZPA2 131 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 C6orf201Q7Z4U5 140 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 OR10X1Q8NGY0 326 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 CAPSLQ8WWF8 208 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 AKR1E2Q96JD6 320 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 FAAP24Q9BTP7 215 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 LPAR5Q9H1C0 372 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 TAF9BQ9HBM6 251 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 NDUFB11Q9NX14 153 aa15.1■□□□□ 0.01
CKS1B-203ENST00000368439 SHISA3A0PJX4 238 aa15.09■□□□□ 0.01
CKS1B-203ENST00000368439 FOXI3A8MTJ6 420 aaPredicted RBP15.09■□□□□ 0.01
CKS1B-203ENST00000368439 SPINT2O43291 252 aa15.09■□□□□ 0.01
CKS1B-203ENST00000368439 FAM106CPP0CH98 169 aa15.09■□□□□ 0.01
CKS1B-203ENST00000368439 CD28P10747 220 aa15.09■□□□□ 0.01
CKS1B-203ENST00000368439 VDAC2P45880 294 aaPredicted RBP15.09■□□□□ 0.01
CKS1B-203ENST00000368439 C2orf68Q2NKX9 166 aa15.09■□□□□ 0.01
CKS1B-203ENST00000368439 CT45A1Q5HYN5 189 aa15.09■□□□□ 0.01
CKS1B-203ENST00000368439 SLC25A48Q6ZT89 311 aaKnown RBP15.09■□□□□ 0.01
CKS1B-203ENST00000368439 OR2W3Q7Z3T1 314 aa15.09■□□□□ 0.01
CKS1B-203ENST00000368439 ZNF554Q86TJ5 538 aa15.09■□□□□ 0.01
CKS1B-203ENST00000368439 FAM89BQ8N5H3 189 aa15.09■□□□□ 0.01
CKS1B-203ENST00000368439 CT45A3Q8NHU0 189 aa15.09■□□□□ 0.01
CKS1B-203ENST00000368439 NEDD4LQ96PU5 975 aa15.09■□□□□ 0.01
CKS1B-203ENST00000368439 IGHV1-3A0A0C4DH29 117 aa15.08■□□□□ 0
CKS1B-203ENST00000368439 SH2D7A6NKC9 451 aaPredicted RBP15.08■□□□□ 0
CKS1B-203ENST00000368439 ARSBP15848 533 aa15.08■□□□□ 0
CKS1B-203ENST00000368439 ZNF137PP52743 207 aa15.08■□□□□ 0
CKS1B-203ENST00000368439 EBI3Q14213 229 aa15.08■□□□□ 0
CKS1B-203ENST00000368439 ABCA11PQ4W5N1 156 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms