RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SMOC1Q9H4F8 434 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 ERRFI1Q9UJM3 462 aaPredicted RBP12.15□□□□□ -0.46
CD48-201ENST00000368045 RNF150Q9ULK6 438 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 PUS1Q9Y606 427 aaKnown RBP eCLIP12.15□□□□□ -0.46
CD48-201ENST00000368045 KMT2EQ8IZD2 1858 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 A0A1B0GV50 99 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 MED19A0JLT2 244 aaPredicted RBP12.15□□□□□ -0.46
CD48-201ENST00000368045 TNFSF12O43508 249 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 OR2C1O95371 312 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 IFNA17P01571 189 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 ACAA1P09110 424 aaPredicted RBP12.15□□□□□ -0.46
CD48-201ENST00000368045 OR8U8P0C7N1 319 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 DAOP14920 347 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 EPHA1P21709 976 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 MEOX1P50221 254 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 RPS23P62266 143 aaKnown RBP12.15□□□□□ -0.46
CD48-201ENST00000368045 ICAM4Q14773 271 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 ACSF3Q4G176 576 aaPredicted RBP12.15□□□□□ -0.46
CD48-201ENST00000368045 FAM24BQ8N5W8 94 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 TMEM217Q8N7C4 229 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 GPHA2Q96T91 129 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 LIN7CQ9NUP9 197 aaKnown RBP12.15□□□□□ -0.46
CD48-201ENST00000368045 POLDIP2Q9Y2S7 368 aa12.15□□□□□ -0.46
CD48-201ENST00000368045 A0A1W2PPE2 198 aa12.14□□□□□ -0.47
CD48-201ENST00000368045 H3BQ15 152 aa12.14□□□□□ -0.47
CD48-201ENST00000368045 IL18BPO95998 194 aa12.14□□□□□ -0.47
CD48-201ENST00000368045 IGHV2-5P01817 119 aa12.14□□□□□ -0.47
CD48-201ENST00000368045 PSG2P11465 335 aa12.14□□□□□ -0.47
CD48-201ENST00000368045 MPLP40238 635 aa12.14□□□□□ -0.47
CD48-201ENST00000368045 FBXW9Q5XUX1 488 aa12.14□□□□□ -0.47
CD48-201ENST00000368045 ZNF497Q6ZNH5 498 aa12.14□□□□□ -0.47
CD48-201ENST00000368045 MDS2Q8NDY4 140 aa12.14□□□□□ -0.47
CD48-201ENST00000368045 OR51H1Q8NH63 302 aa12.14□□□□□ -0.47
CD48-201ENST00000368045 RNASE11Q8TAA1 199 aaKnown RBP12.14□□□□□ -0.47
CD48-201ENST00000368045 PARD6GQ9BYG4 376 aaPredicted RBP12.14□□□□□ -0.47
CD48-201ENST00000368045 SIRT7Q9NRC8 400 aa12.14□□□□□ -0.47
CD48-201ENST00000368045 PLA2G3Q9NZ20 509 aa12.14□□□□□ -0.47
CD48-201ENST00000368045 A0A0G2JRQ6 117 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 hCG_1809904A0A1W2PP81 198 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 A0A1W2PR64 198 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 A0A1W2PRV1 198 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 CXorf65A6NEN9 183 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 LILRA1O75019 489 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 ARG1P05089 322 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 CA6P23280 308 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 ERVK11-1P61568 191 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 B2MP61769 119 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 MRPL49Q13405 166 aaKnown RBP12.13□□□□□ -0.47
CD48-201ENST00000368045 SLC10A1Q14973 349 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 TBC1D28Q2M2D7 210 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 OR2T2Q6IF00 324 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 LINC00696Q6ZRV3 163 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 SLC35E3Q7Z769 313 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 MDP1Q86V88 176 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 ZNF295-AS1Q8N0V1 137 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 C17orf78Q8N4C9 275 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 CLDND2Q8NHS1 167 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 MUCL1Q96DR8 90 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 FER1L6-AS2Q96M78 137 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 PSMG3Q9BT73 122 aaPredicted RBP12.13□□□□□ -0.47
CD48-201ENST00000368045 SEBOXQ9HB31 216 aaPredicted RBP12.13□□□□□ -0.47
CD48-201ENST00000368045 PRSS50Q9UI38 385 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 RFNGQ9Y644 331 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 RNF212BA8MTL3 300 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 ZNHIT1O43257 154 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 SYNGR2O43760 224 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 RUNX1Q01196 453 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 TESK1Q15569 626 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 SLC25A24Q6NUK1 477 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 HEPN1Q6WQI6 88 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 ZNF429Q86V71 674 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 SCGB1C1Q8TD33 95 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 TCEAL3Q969E4 200 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 RAB39BQ96DA2 213 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 TVP23CQ96ET8 276 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 WIPI2Q9Y4P8 454 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 LIPGQ9Y5X9 500 aa12.13□□□□□ -0.47
CD48-201ENST00000368045 LOC102723971A0A1B0GUV8 181 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 B4DEV8 164 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 FAM90A26D6RGX4 464 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 AP4M1O00189 453 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 MT-CO3P00414 261 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 IGKV1-39P01597 117 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 IGKV1D-39P04432 117 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 UBE2KP61086 200 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 HBG1P69891 147 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 HBG2P69892 147 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 GABRA6Q16445 453 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 HAGHQ16775 308 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 ADAM5Q6NVV9 412 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 THNSL2Q86YJ6 484 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 NIPSNAP3BQ9BS92 247 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 MBNL3Q9NUK0 354 aaKnown RBP12.12□□□□□ -0.47
CD48-201ENST00000368045 OR1A1Q9P1Q5 309 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 CACNG5Q9UF02 275 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 CNTRLQ7Z7A1 2325 aa12.12□□□□□ -0.47
CD48-201ENST00000368045 A0A1W2PNU3 283 aaPredicted RBP12.11□□□□□ -0.47
CD48-201ENST00000368045 SLC33A1O00400 549 aaPredicted RBP12.11□□□□□ -0.47
CD48-201ENST00000368045 RHBDL1O75783 438 aa12.11□□□□□ -0.47
CD48-201ENST00000368045 IGLV2-14P01704 120 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms