RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 NEIL1Q96FI4 390 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 HELZP42694 1942 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 CACNA1EQ15878 2313 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 NEURL1O76050 574 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 RNPS1Q15287 305 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR5A2Q8NGI9 324 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 LRFN3Q9BTN0 628 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 TMEM74BQ9NUR3 256 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 F5P12259 2224 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A10PA6NDY2 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A18PA6NE21 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A16PA6NEW6 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A20PA6NIJ5 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A8PA6NJQ4 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A7PA6NKC0 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A22PA8MWA6 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A12PA8MX19 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A5PA8MXJ8 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A23PA8MXZ1 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 MASP2O00187 686 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FGF2P09038 288 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A15PP0C7V4 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A13PP0C7W8 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A14PP0C7W9 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM90A24PP0C7X0 464 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 MDH2P40926 338 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 TMEM33P57088 247 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 STARD6P59095 220 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 C6orf201Q7Z4U5 140 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 C17orf82Q86X59 251 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR5D13Q8NGL4 314 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 SPACA5Q96QH8 159 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 HSPB9Q9BQS6 159 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 VSIG4Q9Y279 399 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 CLEC18AA5D8T8 446 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM24AA6NFZ4 105 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 DEGS1O15121 323 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 SEC11BP0C7V7 166 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 GLRA1P23415 457 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 Q5BKY6 102 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 CLEC18CQ8NCF0 446 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR10AD1Q8NGE0 317 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 WDR61Q9GZS3 305 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 CALHM2Q9HA72 323 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 DNAJC4Q9NNZ3 241 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 ANXA10Q9UJ72 324 aa4.7□□□□□ -1.66
CDC42BPA-204ENST00000366767 PLXND1Q9Y4D7 1925 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 SOD3P08294 240 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 SRP14P37108 136 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 TFF2Q03403 129 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 CEACAM16Q2WEN9 425 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM27BQ5VT28 67 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 OTPQ5XKR4 325 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 LIAT1Q6ZQX7 453 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR5C1Q8NGR4 320 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 PIPOXQ9P0Z9 390 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 MPC1Q9Y5U8 109 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 TPRP12270 2363 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 IGHV5-10-1A0A0J9YXX1 117 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM87AP0C7U9 286 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 FHITP49789 147 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 EMP1P54849 157 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 ARG2P78540 354 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 NUDT10Q8NFP7 164 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZNF407Q9C0G0 2248 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 IGLV3-12A0A075B6K2 115 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 PMS2P1A4D2B8 440 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 TGFBR3LH3BV60 316 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 APCSP02743 223 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 MMP9P14780 707 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 SUB1P53999 127 aaKnown RBP eCLIP4.69□□□□□ -1.668e-6■■■□□ 15.4
CDC42BPA-204ENST00000366767 GNG3P63215 75 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 VAX2Q9UIW0 290 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 TGIF2-C20orf24A0A0A6YYL0 155 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 GAPDHP04406 335 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 MICBQ29980 383 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR10G8Q8NGN5 311 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR2Y1Q8NGV0 311 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 TMEM54Q969K7 222 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 TAAR6Q96RI8 345 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZNF32P17041 273 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 DMWDQ09019 674 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 GAMTQ14353 236 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 ACY3Q96HD9 319 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 ABHD14BQ96IU4 210 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 AQP10Q96PS8 301 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 OBP2BQ9NPH6 170 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZNF256Q9Y2P7 627 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 SHISA8B8ZZ34 492 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 ISLRO14498 428 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 NPIPB7O75200 414 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 IL2RAP01589 272 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 LIFP15018 202 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 BCL3P20749 454 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 SRSF5Q13243 272 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 PMCHL1Q16048 86 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 HIST1H2BAQ96A08 127 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 SLC26A1Q9H2B4 701 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 GNG12Q9UBI6 72 aa4.69□□□□□ -1.66
CDC42BPA-204ENST00000366767 IGHV3-15A0A0B4J1V0 119 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms