RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 GP6Q9HCN6 339 aa10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 ADAP1O75689 374 aa10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 BCL2P10415 239 aa10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 POLR2GP62487 172 aaKnown RBP eCLIP10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 APOBEC4Q8WW27 367 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 PTBP3O95758 552 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 FGF12P61328 243 aa10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 MRPS11P82912 194 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 DTD1Q8TEA8 209 aa10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 MARS2Q96GW9 593 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 FAM24AA6NFZ4 105 aa10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 SELENOTP62341 195 aa10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 UBE2L3P68036 154 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 FGF5P12034 268 aa10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 NRN1LQ496H8 165 aa10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 OR10D4PQ8NGN7 298 aa10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 GOLT1BQ9Y3E0 138 aa10.52□□□□□ -0.73
CDC42BPA-203ENST00000366766 PMS2P11Q13670 270 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 FHL5Q5TD97 284 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 PRR27Q6MZM9 219 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 CCDC144NLQ6NUI1 221 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 C1QL3Q5VWW1 255 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 FAM24BQ8N5W8 94 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 LRRC3BQ96PB8 259 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 PKIBQ9C010 78 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 TTRP02766 147 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 TEPPQ6URK8 271 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 ZAR1Q86SH2 424 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 KCNK7Q9Y2U2 307 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 EWSR1Q01844 656 aaKnown RBP eCLIP10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 OR52L2PQ8NGH6 319 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 HIST1H1EP10412 219 aaKnown RBP10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 PRF1P14222 555 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 BMP5P22003 454 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 RPS4XP62701 263 aaKnown RBP10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 OR1L8Q8NGR8 309 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 LINC00052Q96N35 136 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 LOC102723971A0A1B0GUV8 181 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 CORTO00230 105 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 SLC25A5P05141 298 aaKnown RBP10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 PRDM14Q9GZV8 571 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 TMEM50BP56557 158 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 ANKRD55Q3KP44 614 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 DCAF10Q5QP82 559 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 LIPGQ9Y5X9 500 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 SYNGR1O43759 233 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 MRGPRDQ8TDS7 321 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 SAP30LQ9HAJ7 183 aa10.51□□□□□ -0.73
CDC42BPA-203ENST00000366766 NPY1RP25929 384 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 KIR3DL2P43630 455 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 SNRPEP62304 92 aaKnown RBP10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 C19orf48Q6RUI8 117 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 DOLPP1Q86YN1 238 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 C7orf77A4D0Y5 90 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 HRKO00198 91 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 GATCO43716 136 aaKnown RBP10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 S100A4P26447 101 aaKnown RBP10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 FUT5Q11128 374 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 C19orf24Q9BVV8 132 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 RAB29O14966 203 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 KLK10O43240 276 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 GCSHP23434 173 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 TMEM37Q8WXS4 190 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 TRGV8A0A0C4DH27 118 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 CD74P04233 296 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 IFITM3Q01628 133 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 ETFDHQ16134 617 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 OR2M7Q8NG81 312 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 MS4A5Q9H3V2 200 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 PARD6AQ9NPB6 346 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 HPRT1P00492 218 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 FCGR3AP08637 254 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 AMTP48728 403 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 OR8G5Q8NG78 346 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 GCM2O75603 506 aaPredicted RBP10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 VAMP3Q15836 100 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 EIF4E3Q8N5X7 224 aaKnown RBP10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 CD8AP01732 235 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 HSPB1P04792 205 aaKnown RBP10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 RIGQ13278 110 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 OTPQ5XKR4 325 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 ARL2-SNX15V9GYD0 113 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 NMBP08949 121 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 SUCLG1P53597 346 aaKnown RBP10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 OR10C1Q96KK4 312 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 RNF7Q9UBF6 113 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 NACAE9PAV3 2078 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 EML2O95834 649 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 IGKV1D-16P01601 117 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 ZNF665Q9H7R5 613 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 PLA2G3Q9NZ20 509 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 HSPB8Q9UJY1 196 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 KLK13Q9UKR3 277 aa10.5□□□□□ -0.73
CDC42BPA-203ENST00000366766 SERTM2A0A1B0GWG4 89 aa10.49□□□□□ -0.73
CDC42BPA-203ENST00000366766 CRISP2P16562 243 aa10.49□□□□□ -0.73
CDC42BPA-203ENST00000366766 HES3Q5TGS1 186 aa10.49□□□□□ -0.73
CDC42BPA-203ENST00000366766 ZNF343Q6P1L6 599 aa10.49□□□□□ -0.73
CDC42BPA-203ENST00000366766 ADIPOR1Q96A54 375 aa10.49□□□□□ -0.73
CDC42BPA-203ENST00000366766 K7ESF4 209 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms